Literature DB >> 18022361

RNA quality control in eukaryotes.

Meenakshi K Doma1, Roy Parker.   

Abstract

Eukaryotic cells contain numerous RNA quality-control systems that are important for shaping the transcriptome of eukaryotic cells. These systems not only prevent accumulation of nonfunctional RNAs but also regulate normal mRNAs, repress viral and parasitic RNAs, and potentially contribute to the evolution of new RNAs and hence proteins. These quality-control circuits can be viewed as a series of kinetic competitions between steps in normal RNA biogenesis or function and RNA degradation pathways. These RNA quality-control circuits depend on specific adaptor proteins that target aberrant RNAs for degradation as well as the coupling of individual steps in mRNA biogenesis and function.

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Year:  2007        PMID: 18022361     DOI: 10.1016/j.cell.2007.10.041

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  162 in total

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Journal:  EMBO J       Date:  2010-06-08       Impact factor: 11.598

Review 2.  Error prevention and mitigation as forces in the evolution of genes and genomes.

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3.  Viral factors reveal a role for REF/Aly in nuclear RNA stability.

Authors:  Sarah H Stubbs; Olga V Hunter; Ashley Hoover; Nicholas K Conrad
Journal:  Mol Cell Biol       Date:  2012-01-30       Impact factor: 4.272

4.  Molecular analysis of afibrinogenemic mutations caused by a homozygous FGA1238 bp deletion, and a compound heterozygous FGA1238 bp deletion and novel FGA c.54+3A>C substitution.

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Review 5.  Novel endoribonucleases as central players in various pathways of eukaryotic RNA metabolism.

Authors:  Rafal Tomecki; Andrzej Dziembowski
Journal:  RNA       Date:  2010-07-30       Impact factor: 4.942

6.  Addition of poly(A) and poly(A)-rich tails during RNA degradation in the cytoplasm of human cells.

Authors:  Shimyn Slomovic; Ella Fremder; Raymond H G Staals; Ger J M Pruijn; Gadi Schuster
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-05       Impact factor: 11.205

7.  Omnipotent role of archaeal elongation factor 1 alpha (EF1α in translational elongation and termination, and quality control of protein synthesis.

Authors:  Kazuki Saito; Kan Kobayashi; Miki Wada; Izumi Kikuno; Akira Takusagawa; Masahiro Mochizuki; Toshio Uchiumi; Ryuichiro Ishitani; Osamu Nureki; Koichi Ito
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-25       Impact factor: 11.205

8.  Dissection of Dom34-Hbs1 reveals independent functions in two RNA quality control pathways.

Authors:  Antonia M G van den Elzen; Julien Henri; Noureddine Lazar; María Eugenia Gas; Dominique Durand; François Lacroute; Magali Nicaise; Herman van Tilbeurgh; Bertrand Séraphin; Marc Graille
Journal:  Nat Struct Mol Biol       Date:  2010-11-21       Impact factor: 15.369

9.  Mtr4-like protein coordinates nuclear RNA processing for heterochromatin assembly and for telomere maintenance.

Authors:  Nathan N Lee; Venkata R Chalamcharla; Francisca Reyes-Turcu; Sameet Mehta; Martin Zofall; Vanivilasini Balachandran; Jothy Dhakshnamoorthy; Nitika Taneja; Soichiro Yamanaka; Ming Zhou; Shiv I S Grewal
Journal:  Cell       Date:  2013-11-07       Impact factor: 41.582

10.  Inefficient SRP interaction with a nascent chain triggers a mRNA quality control pathway.

Authors:  Andrey L Karamyshev; Anna E Patrick; Zemfira N Karamysheva; Dustin S Griesemer; Henry Hudson; Sandra Tjon-Kon-Sang; IngMarie Nilsson; Hendrik Otto; Qinghua Liu; Sabine Rospert; Gunnar von Heijne; Arthur E Johnson; Philip J Thomas
Journal:  Cell       Date:  2014-01-16       Impact factor: 41.582

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