Literature DB >> 18008180

Lipid-assisted synthesis of RNA-like polymers from mononucleotides.

Sudha Rajamani1, Alexander Vlassov, Seico Benner, Amy Coombs, Felix Olasagasti, David Deamer.   

Abstract

A fundamental problem in research on the origin of life is the process by which polymers capable of catalysis and replication were produced on the early Earth. Here we show that RNA-like polymers can be synthesized non-enzymatically from mononucleotides in lipid environments. The RNA-like polymers were initially identified by nanopore analysis, a technique with single molecule sensitivity. To our knowledge, this is the first such application of a nanopore instrument to detect RNA synthesis under simulated prebiotic conditions. The synthesis of the RNA-like polymers was confirmed by standard methods of enzymatic end labeling followed by gel electrophoresis. Chemical activation of the mononucleotides is not required. Instead, synthesis of phosphodiester bonds is driven by the chemical potential of fluctuating anhydrous and hydrated conditions, with heat providing activation energy during dehydration. In the final hydration step, the RNA-like polymer is encapsulated within lipid vesicles. This process provides a laboratory model of an early stage of evolution toward an RNA World.

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Year:  2007        PMID: 18008180     DOI: 10.1007/s11084-007-9113-2

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  30 in total

1.  Sequence-specific detection of individual DNA strands using engineered nanopores.

Authors:  S Howorka; S Cheley; H Bayley
Journal:  Nat Biotechnol       Date:  2001-07       Impact factor: 54.908

2.  The origin of life--did it occur at high temperatures?

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Review 3.  Characterization of nucleic acids by nanopore analysis.

Authors:  David W Deamer; Daniel Branton
Journal:  Acc Chem Res       Date:  2002-10       Impact factor: 22.384

4.  One-step, regioselective synthesis of up to 50-mers of RNA oligomers by montmorillonite catalysis.

Authors:  Wenhua Huang; James P Ferris
Journal:  J Am Chem Soc       Date:  2006-07-12       Impact factor: 15.419

5.  Oligomerization of thioglutamic acid: encapsulated reactions and lipid catalysis.

Authors:  H H Zepik; S Rajamani; M-C Maurel; D Deamer
Journal:  Orig Life Evol Biosph       Date:  2007-05-26       Impact factor: 1.950

6.  Characterization of individual polynucleotide molecules using a membrane channel.

Authors:  J J Kasianowicz; E Brandin; D Branton; D W Deamer
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-26       Impact factor: 11.205

7.  Catalysts for the self-polymerization of adenosine cyclic 2', 3'-phosphate.

Authors:  M S Verlander; R Lohrmann; L E Orgel
Journal:  J Mol Evol       Date:  1973-11-27       Impact factor: 2.395

8.  Early chemical evolution of nucleic acids: a theoretical model.

Authors:  D A Usher
Journal:  Science       Date:  1977-04-15       Impact factor: 47.728

9.  Hydrolytic stability of biomolecules at high temperatures and its implication for life at 250 degrees C.

Authors:  R H White
Journal:  Nature       Date:  1984 Aug 2-8       Impact factor: 49.962

Review 10.  Extremophiles and their adaptation to hot environments.

Authors:  K O Stetter
Journal:  FEBS Lett       Date:  1999-06-04       Impact factor: 4.124

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  83 in total

Review 1.  From self-assembled vesicles to protocells.

Authors:  Irene A Chen; Peter Walde
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-06-02       Impact factor: 10.005

Review 2.  Setting the stage: the history, chemistry, and geobiology behind RNA.

Authors:  Steven A Benner; Hyo-Joong Kim; Zunyi Yang
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-01-01       Impact factor: 10.005

3.  Question 5: does the RNA-world still retain its appeal after 40 years of research?

Authors:  Pierre-Alain Monnard
Journal:  Orig Life Evol Biosph       Date:  2007-07-05       Impact factor: 1.950

4.  Computational Models of Polymer Synthesis Driven by Dehydration/Rehydration Cycles: Repurination in Simulated Hydrothermal Fields.

Authors:  Mason Hargrave; Spencer K Thompson; David Deamer
Journal:  J Mol Evol       Date:  2018-09-15       Impact factor: 2.395

Review 5.  Darwin's warm little pond revisited: from molecules to the origin of life.

Authors:  Hartmut Follmann; Carol Brownson
Journal:  Naturwissenschaften       Date:  2009-09-17

6.  Origin of self-replicating biopolymers: autocatalytic feedback can jump-start the RNA world.

Authors:  Meng Wu; Paul G Higgs
Journal:  J Mol Evol       Date:  2009-09-24       Impact factor: 2.395

7.  Life began when evolution began: a lipidic vesicle-based scenario.

Authors:  Marc Tessera
Journal:  Orig Life Evol Biosph       Date:  2009-10-15       Impact factor: 1.950

8.  Catalytic effects of Murchison material: prebiotic synthesis and degradation of RNA precursors.

Authors:  Raffaele Saladino; Claudia Crestini; Cristina Cossetti; Ernesto Di Mauro; David Deamer
Journal:  Orig Life Evol Biosph       Date:  2011-04-12       Impact factor: 1.950

9.  Salt-promoted synthesis of RNA-like molecules in simulated hydrothermal conditions.

Authors:  Laura Da Silva; Marie-Christine Maurel; David Deamer
Journal:  J Mol Evol       Date:  2014-12-09       Impact factor: 2.395

10.  How the first life on Earth survived its biggest threat - water.

Authors:  Michael Marshall
Journal:  Nature       Date:  2020-12       Impact factor: 49.962

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