Literature DB >> 20519344

From self-assembled vesicles to protocells.

Irene A Chen1, Peter Walde.   

Abstract

Self-assembled vesicles are essential components of primitive cells. We review the importance of vesicles during the origins of life, fundamental thermodynamics and kinetics of self-assembly, and experimental models of simple vesicles, focusing on prebiotically plausible fatty acids and their derivatives. We review recent work on interactions of simple vesicles with RNA and other studies of the transition from vesicles to protocells. Finally we discuss current challenges in understanding the biophysics of protocells, as well as conceptual questions in information transmission and self-replication.

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Year:  2010        PMID: 20519344      PMCID: PMC2890201          DOI: 10.1101/cshperspect.a002170

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  61 in total

1.  Oligomerization of ribonucleotides on montmorillonite: reaction of the 5'-phosphorimidazolide of adenosine.

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Journal:  Science       Date:  1992-09-04       Impact factor: 47.728

2.  Information content in organic molecules: quantification and statistical structure via Brownian processing.

Authors:  Daniel J Graham; Christopher Malarkey; Matthew V Schulmerich
Journal:  J Chem Inf Comput Sci       Date:  2004 Sep-Oct

3.  Self-assembly processes in the prebiotic environment.

Authors:  David Deamer; Sara Singaram; Sudha Rajamani; Vladimir Kompanichenko; Stephen Guggenheim
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2006-10-29       Impact factor: 6.237

4.  Prevolutionary dynamics and the origin of evolution.

Authors:  Martin A Nowak; Hisashi Ohtsuki
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-12       Impact factor: 11.205

5.  Theory of self-assembly of lipid bilayers and vesicles.

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Journal:  Biochim Biophys Acta       Date:  1977-10-17

6.  Group selection of early replicators and the origin of life.

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Journal:  J Theor Biol       Date:  1987-10-21       Impact factor: 2.691

7.  Molecular distribution of monocarboxylic acids in Asuka carbonaceous chondrites from Antarctica.

Authors:  H Naraoka; A Shimoyama; K Harada
Journal:  Orig Life Evol Biosph       Date:  1999-03       Impact factor: 1.950

8.  "Primitive" membrane from polyprenyl phosphates and polyprenyl alcohols.

Authors:  Stéphane Streiff; Nigel Ribeiro; Zhengyan Wu; Elzbieta Gumienna-Kontecka; Mourad Elhabiri; Anne Marie Albrecht-Gary; Guy Ourisson; Yoichi Nakatani
Journal:  Chem Biol       Date:  2007-03

9.  Carbon isotope composition of low molecular weight hydrocarbons and monocarboxylic acids from Murchison meteorite.

Authors:  G Yuen; N Blair; D J Des Marais; S Chang
Journal:  Nature       Date:  1984 Jan 19-25       Impact factor: 49.962

10.  Fatty acid chemistry at the oil-water interface: self-propelled oil droplets.

Authors:  Martin M Hanczyc; Taro Toyota; Takashi Ikegami; Norman Packard; Tadashi Sugawara
Journal:  J Am Chem Soc       Date:  2007-07-06       Impact factor: 15.419

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  58 in total

Review 1.  Toward understanding protocell mechanosensation.

Authors:  Daniel Balleza
Journal:  Orig Life Evol Biosph       Date:  2010-11-17       Impact factor: 1.950

Review 2.  Feeling the hidden mechanical forces in lipid bilayer is an original sense.

Authors:  Andriy Anishkin; Stephen H Loukin; Jinfeng Teng; Ching Kung
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-21       Impact factor: 11.205

3.  Designer amphiphilic proteins as building blocks for the intracellular formation of organelle-like compartments.

Authors:  Matthias C Huber; Andreas Schreiber; Philipp von Olshausen; Balázs R Varga; Oliver Kretz; Barbara Joch; Sabine Barnert; Rolf Schubert; Stefan Eimer; Péter Kele; Stefan M Schiller
Journal:  Nat Mater       Date:  2014-11-02       Impact factor: 43.841

Review 4.  Tuning ion channel mechanosensitivity by asymmetry of the transbilayer pressure profile.

Authors:  Boris Martinac; Navid Bavi; Pietro Ridone; Yury A Nikolaev; Adam D Martinac; Yoshitaka Nakayama; Paul R Rohde; Omid Bavi
Journal:  Biophys Rev       Date:  2018-09-04

5.  Self-assembly of phosphate amphiphiles in mixtures of prebiotically plausible surfactants.

Authors:  A N Albertsen; C D Duffy; J D Sutherland; P-A Monnard
Journal:  Astrobiology       Date:  2014-06-02       Impact factor: 4.335

Review 6.  The Astrobiology Primer v2.0.

Authors:  Shawn D Domagal-Goldman; Katherine E Wright; Katarzyna Adamala; Leigh Arina de la Rubia; Jade Bond; Lewis R Dartnell; Aaron D Goldman; Kennda Lynch; Marie-Eve Naud; Ivan G Paulino-Lima; Kelsi Singer; Marina Walther-Antonio; Ximena C Abrevaya; Rika Anderson; Giada Arney; Dimitra Atri; Armando Azúa-Bustos; Jeff S Bowman; William J Brazelton; Gregory A Brennecka; Regina Carns; Aditya Chopra; Jesse Colangelo-Lillis; Christopher J Crockett; Julia DeMarines; Elizabeth A Frank; Carie Frantz; Eduardo de la Fuente; Douglas Galante; Jennifer Glass; Damhnait Gleeson; Christopher R Glein; Colin Goldblatt; Rachel Horak; Lev Horodyskyj; Betül Kaçar; Akos Kereszturi; Emily Knowles; Paul Mayeur; Shawn McGlynn; Yamila Miguel; Michelle Montgomery; Catherine Neish; Lena Noack; Sarah Rugheimer; Eva E Stüeken; Paulina Tamez-Hidalgo; Sara Imari Walker; Teresa Wong
Journal:  Astrobiology       Date:  2016-08       Impact factor: 4.335

7.  Research program for a search of the origin of Darwinian evolution : Research program for a vesicle-based model of the origin of Darwinian evolution on prebiotic early Earth.

Authors:  Marc Tessera
Journal:  Orig Life Evol Biosph       Date:  2016-03-11       Impact factor: 1.950

8.  The Origin(s) of Cell(s): Pre-Darwinian Evolution from FUCAs to LUCA : To Carl Woese (1928-2012), for his Conceptual Breakthrough of Cellular Evolution.

Authors:  Shiping Tang
Journal:  J Mol Evol       Date:  2021-06-25       Impact factor: 2.395

9.  Photochemical Synthesis of Oligomeric Amphiphiles from Alkyl Oxoacids in Aqueous Environments.

Authors:  Rebecca J Rapf; Russell J Perkins; Haishen Yang; Garret M Miyake; Barry K Carpenter; Veronica Vaida
Journal:  J Am Chem Soc       Date:  2017-05-16       Impact factor: 15.419

10.  Probing complexity: thermodynamics and computational mechanics approaches to origins studies.

Authors:  Stuart J Bartlett; Patrick Beckett
Journal:  Interface Focus       Date:  2019-10-18       Impact factor: 3.906

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