Literature DB >> 18003937

Sus1, Sac3, and Thp1 mediate post-transcriptional tethering of active genes to the nuclear rim as well as to non-nascent mRNP.

Julia A Chekanova1, Katharine C Abruzzi, Michael Rosbash, Dmitry A Belostotsky.   

Abstract

Errors in the mRNP biogenesis pathway can lead to retention of mRNA in discrete, transcription-site-proximal foci. This RNA remains tethered adjacent to the transcription site long after transcriptional shutoff. Here we identify Sus1, Thp1, and Sac3 as factors required for the persistent tethering of such foci (dots) to their cognate genes. We also show that the prolonged association of previously activated GAL genes with the nuclear periphery after transcriptional shutoff is similarly dependent on the Sac3-Thp1-Sus1-Cdc31 complex. We suggest that the complex associates with nuclear mRNP and that mRNP properties influence the association of dot-confined mRNA with its gene of origin as well as the post-transcriptional retention of the cognate gene at the nuclear periphery. These findings indicate a coupling between the mRNA-to-gene and gene-to-nuclear periphery tethering. Taken together with other recent findings, these observations also highlight the importance of nuclear mRNP to the mobilization of active genes to the nuclear rim.

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Year:  2007        PMID: 18003937      PMCID: PMC2151039          DOI: 10.1261/rna.764108

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  35 in total

1.  The Spt components of SAGA facilitate TBP binding to a promoter at a post-activator-binding step in vivo.

Authors:  A M Dudley; C Rougeulle; F Winston
Journal:  Genes Dev       Date:  1999-11-15       Impact factor: 11.361

2.  The mRNA export machinery requires the novel Sac3p-Thp1p complex to dock at the nucleoplasmic entrance of the nuclear pores.

Authors:  Tamás Fischer; Katja Strässer; Attila Rácz; Susana Rodriguez-Navarro; Marisa Oppizzi; Petra Ihrig; Johannes Lechner; Ed Hurt
Journal:  EMBO J       Date:  2002-11-01       Impact factor: 11.598

Review 3.  Early formation of mRNP: license for export or quality control?

Authors:  Torben Heick Jensen; Ken Dower; Domenico Libri; Michael Rosbash
Journal:  Mol Cell       Date:  2003-05       Impact factor: 17.970

4.  Interactions between mRNA export commitment, 3'-end quality control, and nuclear degradation.

Authors:  Domenico Libri; Ken Dower; Jocelyne Boulay; Rune Thomsen; Michael Rosbash; Torben Heick Jensen
Journal:  Mol Cell Biol       Date:  2002-12       Impact factor: 4.272

5.  Systematic genetic analysis with ordered arrays of yeast deletion mutants.

Authors:  A H Tong; M Evangelista; A B Parsons; H Xu; G D Bader; N Pagé; M Robinson; S Raghibizadeh; C W Hogue; H Bussey; B Andrews; M Tyers; C Boone
Journal:  Science       Date:  2001-12-14       Impact factor: 47.728

6.  The DECD box putative ATPase Sub2p is an early mRNA export factor.

Authors:  T H Jensen; J Boulay; M Rosbash; D Libri
Journal:  Curr Biol       Date:  2001-10-30       Impact factor: 10.834

7.  Nab2p and the Thp1p-Sac3p complex functionally interact at the interface between transcription and mRNA metabolism.

Authors:  Mercedes Gallardo; Rosa Luna; Hediye Erdjument-Bromage; Paul Tempst; Andres Aguilera
Journal:  J Biol Chem       Date:  2003-04-17       Impact factor: 5.157

8.  Quality control of mRNA 3'-end processing is linked to the nuclear exosome.

Authors:  P Hilleren; T McCarthy; M Rosbash; R Parker; T H Jensen
Journal:  Nature       Date:  2001-10-04       Impact factor: 49.962

9.  Sac3 is an mRNA export factor that localizes to cytoplasmic fibrils of nuclear pore complex.

Authors:  Elissa P Lei; Charlene A Stern; Birthe Fahrenkrog; Heike Krebber; Terence I Moy; Ueli Aebi; Pamela A Silver
Journal:  Mol Biol Cell       Date:  2003-03       Impact factor: 4.138

10.  Gene recruitment of the activated INO1 locus to the nuclear membrane.

Authors:  Jason H Brickner; Peter Walter
Journal:  PLoS Biol       Date:  2004-09-28       Impact factor: 8.029

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  35 in total

Review 1.  The nuclear pore complex and nuclear transport.

Authors:  Susan R Wente; Michael P Rout
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-07-14       Impact factor: 10.005

Review 2.  The nuclear pore complex: bridging nuclear transport and gene regulation.

Authors:  Caterina Strambio-De-Castillia; Mario Niepel; Michael P Rout
Journal:  Nat Rev Mol Cell Biol       Date:  2010-07       Impact factor: 94.444

Review 3.  Functional interactions between nucleoporins and chromatin.

Authors:  Yun Liang; Martin W Hetzer
Journal:  Curr Opin Cell Biol       Date:  2010-10-26       Impact factor: 8.382

4.  Multifunctional factor ENY2 is associated with the THO complex and promotes its recruitment onto nascent mRNA.

Authors:  Daria V Kopytova; Anastasija V Orlova; Alexey N Krasnov; Dmitriy Ya Gurskiy; Julia V Nikolenko; Elena N Nabirochkina; Yulii V Shidlovskii; Sofia G Georgieva
Journal:  Genes Dev       Date:  2010-01-01       Impact factor: 11.361

Review 5.  Quality control of mRNP in the nucleus.

Authors:  Manfred Schmid; Torben Heick Jensen
Journal:  Chromosoma       Date:  2008-06-18       Impact factor: 4.316

Review 6.  Biogenesis of mRNPs: integrating different processes in the eukaryotic nucleus.

Authors:  Rosa Luna; Hélène Gaillard; Cristina González-Aguilera; Andrés Aguilera
Journal:  Chromosoma       Date:  2008-04-22       Impact factor: 4.316

7.  Gene loops function to maintain transcriptional memory through interaction with the nuclear pore complex.

Authors:  Sue Mei Tan-Wong; Hashanthi D Wijayatilake; Nick J Proudfoot
Journal:  Genes Dev       Date:  2009-11-15       Impact factor: 11.361

8.  A physiological role for gene loops in yeast.

Authors:  Jean-Philippe Lainé; Badri Nath Singh; Shankarling Krishnamurthy; Michael Hampsey
Journal:  Genes Dev       Date:  2009-11-15       Impact factor: 11.361

9.  The THP1-SAC3-SUS1-CDC31 complex works in transcription elongation-mRNA export preventing RNA-mediated genome instability.

Authors:  Cristina González-Aguilera; Cristina Tous; Belén Gómez-González; Pablo Huertas; Rosa Luna; Andrés Aguilera
Journal:  Mol Biol Cell       Date:  2008-07-30       Impact factor: 4.138

Review 10.  Transcriptional memory at the nuclear periphery.

Authors:  Jason H Brickner
Journal:  Curr Opin Cell Biol       Date:  2009-01-30       Impact factor: 8.382

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