Literature DB >> 17993409

Kinase packing defects as drug targets.

Alejandro Crespo1, Ariel Fernández.   

Abstract

Protein kinases constitute major targets in molecular cancer therapy. The structural conservation of kinases causes specificity problems in most drug inhibitors, often resulting in dangerous side effects. Here we survey recent approaches in drug design that exploit a molecular marker for specificity: the pattern of packing defects. These packing defects are solvent-exposed intramolecular hydrogen bonds that may be protected by drugs upon association. In this light, we review design strategies to achieve paralogue discrimination, to control cross reactivity and to overcome drug resistance induced by target mutations.

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Year:  2007        PMID: 17993409      PMCID: PMC2136416          DOI: 10.1016/j.drudis.2007.09.009

Source DB:  PubMed          Journal:  Drug Discov Today        ISSN: 1359-6446            Impact factor:   7.851


  48 in total

Review 1.  The conformational plasticity of protein kinases.

Authors:  Morgan Huse; John Kuriyan
Journal:  Cell       Date:  2002-05-03       Impact factor: 41.582

2.  Clinical use of tyrosine kinase inhibitors: therapy for chronic myelogenous leukemia and other cancers.

Authors:  N J Donato; M Talpaz
Journal:  Clin Cancer Res       Date:  2000-08       Impact factor: 12.531

3.  Proteins with H-bond packing defects are highly interactive with lipid bilayers: Implications for amyloidogenesis.

Authors:  Ariel Fernández; R Stephen Berry
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-18       Impact factor: 11.205

4.  Structural defects and the diagnosis of amyloidogenic propensity.

Authors:  Ariel Fernández; József Kardos; L Ridgway Scott; Yuji Goto; R Stephen Berry
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-12       Impact factor: 11.205

5.  Protein-protein interactions: structurally conserved residues distinguish between binding sites and exposed protein surfaces.

Authors:  Buyong Ma; Tal Elkayam; Haim Wolfson; Ruth Nussinov
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-01       Impact factor: 11.205

6.  Insufficiently dehydrated hydrogen bonds as determinants of protein interactions.

Authors:  Ariel Fernández; Harold A Scheraga
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-23       Impact factor: 11.205

7.  Adherence of packing defects in soluble proteins.

Authors:  Ariel Fernández; L Ridgway Scott
Journal:  Phys Rev Lett       Date:  2003-07-01       Impact factor: 9.161

8.  Structural mechanism for STI-571 inhibition of abelson tyrosine kinase.

Authors:  T Schindler; W Bornmann; P Pellicena; W T Miller; B Clarkson; J Kuriyan
Journal:  Science       Date:  2000-09-15       Impact factor: 47.728

Review 9.  Issues and progress with protein kinase inhibitors for cancer treatment.

Authors:  Janet Dancey; Edward A Sausville
Journal:  Nat Rev Drug Discov       Date:  2003-04       Impact factor: 84.694

10.  The c-kit tyrosine kinase inhibitor STI571 for colorectal cancer therapy.

Authors:  Samir Attoub; Christine Rivat; Sylvie Rodrigues; Saskia Van Bocxlaer; Monique Bedin; Erik Bruyneel; Christophe Louvet; Michel Kornprobst; Thierry André; Marc Mareel; Jan Mester; Christian Gespach
Journal:  Cancer Res       Date:  2002-09-01       Impact factor: 12.701

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