Literature DB >> 17968930

Salivary proteomic and genomic biomarkers for primary Sjögren's syndrome.

Shen Hu1, Jianghua Wang, Jiska Meijer, Sonya Ieong, Yongming Xie, Tianwei Yu, Hui Zhou, Sharon Henry, Arjan Vissink, Justin Pijpe, Cees Kallenberg, David Elashoff, Joseph A Loo, David T Wong.   

Abstract

OBJECTIVE: To identify a panel of protein and messenger RNA (mRNA) biomarkers in human whole saliva (WS) that may be used in the detection of primary Sjögren's syndrome (SS).
METHODS: Mass spectrometry and expression microarray profiling were used to identify candidate protein and mRNA biomarkers of primary SS in WS samples. Validation of the discovered mRNA and protein biomarkers was also demonstrated using real-time quantitative polymerase chain reaction and immunoblotting techniques.
RESULTS: Sixteen WS proteins were found to be down-regulated and 25 WS proteins were found to be up-regulated in primary SS patients compared with matched healthy control subjects. These proteins reflected the damage of glandular cells and inflammation of the oral cavity system in patients with primary SS. In addition, 16 WS peptides (10 up-regulated and 6 down-regulated in primary SS) were found at significantly different levels (P < 0.05) in primary SS patients and controls. Using stringent criteria (3-fold change; P < 0.0005), 27 mRNA in saliva samples were found to be significantly up-regulated in the primary SS patients. Strikingly, 19 of 27 genes that were found to be overexpressed were interferon-inducible or were related to lymphocyte filtration and antigen presentation known to be involved in the pathogenesis of primary SS.
CONCLUSION: Our preliminary study has indicated that WS from patients with primary SS contains molecular signatures that reflect damaged glandular cells and an activated immune response in this autoimmune disease. These candidate proteomic and genomic biomarkers may improve the clinical detection of primary SS once they have been further validated. We also found that WS contains more informative proteins, peptides, and mRNA, as compared with gland-specific saliva, that can be used in generating candidate biomarkers for the detection of primary SS.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17968930      PMCID: PMC2856841          DOI: 10.1002/art.22954

Source DB:  PubMed          Journal:  Arthritis Rheum        ISSN: 0004-3591


  46 in total

1.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

Review 2.  Classification criteria for Sjögren's syndrome: a revised version of the European criteria proposed by the American-European Consensus Group.

Authors:  C Vitali; S Bombardieri; R Jonsson; H M Moutsopoulos; E L Alexander; S E Carsons; T E Daniels; P C Fox; R I Fox; S S Kassan; S R Pillemer; N Talal; M H Weisman
Journal:  Ann Rheum Dis       Date:  2002-06       Impact factor: 19.103

Review 3.  Post-analysis follow-up and validation of microarray experiments.

Authors:  Rodrigo F Chuaqui; Robert F Bonner; Carolyn J M Best; John W Gillespie; Michael J Flaig; Stephen M Hewitt; John L Phillips; David B Krizman; Michael A Tangrea; Mamoun Ahram; W Marston Linehan; Vladimir Knezevic; Michael R Emmert-Buck
Journal:  Nat Genet       Date:  2002-12       Impact factor: 38.330

4.  Proteomic analysis of human brain identifies alpha-enolase as a novel autoantigen in Hashimoto's encephalopathy.

Authors:  Hirofumi Ochi; Izumi Horiuchi; Norie Araki; Tosifusa Toda; Tomohiro Araki; Kaori Sato; Hiroyuki Murai; Manabu Osoegawa; Takeshi Yamada; Ken Okamura; Tomoaki Ogino; Kiyohisa Mizumoto; Hirohumi Yamashita; Hideyuki Saya; Jun-ichi Kira
Journal:  FEBS Lett       Date:  2002-09-25       Impact factor: 4.124

5.  Coordinate regulation of energy transduction modules in Halobacterium sp. analyzed by a global systems approach.

Authors:  Nitin S Baliga; Min Pan; Young Ah Goo; Eugene C Yi; David R Goodlett; Krassen Dimitrov; Paul Shannon; Ruedi Aebersold; Wailap Victor Ng; Leroy Hood
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-28       Impact factor: 11.205

6.  Autoantibodies specific for alpha-enolase in systemic autoimmune disorders.

Authors:  F Pratesi; S Moscato; A Sabbatini; D Chimenti; S Bombardieri; P Migliorini
Journal:  J Rheumatol       Date:  2000-01       Impact factor: 4.666

7.  Sialometry and sialochemistry: a non-invasive approach for diagnosing Sjögren's syndrome.

Authors:  W W I Kalk; A Vissink; B Stegenga; H Bootsma; A V Nieuw Amerongen; C G M Kallenberg
Journal:  Ann Rheum Dis       Date:  2002-02       Impact factor: 19.103

8.  Identification of the 49-kDa autoantigen associated with lymphocytic hypophysitis as alpha-enolase.

Authors:  Damien T O'Dwyer; A Ian Smith; Mary L Matthew; Nicholas M Andronicos; Marie Ranson; Phillip J Robinson; Patricia A Crock
Journal:  J Clin Endocrinol Metab       Date:  2002-02       Impact factor: 5.958

9.  Discovery of oral fluid biomarkers for human oral cancer by mass spectrometry.

Authors:  Shen Hu; Tianwei Yu; Yongming Xie; Yanan Yang; Yang Li; Xiaofeng Zhou; Stephanie Tsung; Rachel R Loo; Joseph R Loo; David T Wong
Journal:  Cancer Genomics Proteomics       Date:  2007 Mar-Apr       Impact factor: 4.069

10.  MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data.

Authors:  Scott W Doniger; Nathan Salomonis; Kam D Dahlquist; Karen Vranizan; Steven C Lawlor; Bruce R Conklin
Journal:  Genome Biol       Date:  2003-01-06       Impact factor: 13.583

View more
  141 in total

1.  Comparison of N-linked Glycoproteins in Human Whole Saliva, Parotid, Submandibular, and Sublingual Glandular Secretions Identified using Hydrazide Chemistry and Mass Spectrometry.

Authors:  Prasanna Ramachandran; Pinmanee Boontheung; Eric Pang; Weihong Yan; David T Wong; Joseph A Loo
Journal:  Clin Proteomics       Date:  2008-12       Impact factor: 3.988

2.  Development of transcriptomic biomarker signature in human saliva to detect lung cancer.

Authors:  Lei Zhang; Hua Xiao; Hui Zhou; Silverio Santiago; Jay M Lee; Edward B Garon; Jieping Yang; Ole Brinkmann; Xinmin Yan; David Akin; David Chia; David Elashoff; No-Hee Park; David T W Wong
Journal:  Cell Mol Life Sci       Date:  2012-06-12       Impact factor: 9.261

Review 3.  Comparative human salivary and plasma proteomes.

Authors:  J A Loo; W Yan; P Ramachandran; D T Wong
Journal:  J Dent Res       Date:  2010-08-25       Impact factor: 6.116

4.  Preclinical validation of salivary biomarkers for primary Sjögren's syndrome.

Authors:  Shen Hu; Kai Gao; Rodney Pollard; Martha Arellano-Garcia; Hui Zhou; Lei Zhang; David Elashoff; Cees G M Kallenberg; Arjan Vissink; David T Wong
Journal:  Arthritis Care Res (Hoboken)       Date:  2010-07-08       Impact factor: 4.794

5.  Prevalidation of salivary biomarkers for oral cancer detection.

Authors:  David Elashoff; Hui Zhou; Jean Reiss; Jianghua Wang; Hua Xiao; Bradley Henson; Shen Hu; Martha Arellano; Uttam Sinha; Anh Le; Diana Messadi; Marilene Wang; Vishad Nabili; Mark Lingen; Darly Morris; Timothy Randolph; Ziding Feng; David Akin; Dragana A Kastratovic; David Chia; Elliot Abemayor; David T W Wong
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2012-02-01       Impact factor: 4.254

Review 6.  The Proteomics of Saliva in Sjögren's Syndrome.

Authors:  Stergios Katsiougiannis; David T W Wong
Journal:  Rheum Dis Clin North Am       Date:  2016-06-21       Impact factor: 2.670

Review 7.  Systems analysis of salivary gland development and disease.

Authors:  Melinda Larsen; Kenneth M Yamada; Kurt Musselmann
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2010 Nov-Dec

8.  Genetics and genomics of Sjögren's syndrome: research provides clues to pathogenesis and novel therapies.

Authors:  Barbara M Segal; Abu N M Nazmul-Hossain; Ketan Patel; Pamela Hughes; Kathy L Moser; Nelson L Rhodus
Journal:  Oral Surg Oral Med Oral Pathol Oral Radiol Endod       Date:  2011-04-16

9.  Role of salivary matrix metalloproteinase-8 (MMP-8) in chronic periodontitis diagnosis.

Authors:  Namita Gupta; N D Gupta; Akash Gupta; Saif Khan; Neha Bansal
Journal:  Front Med       Date:  2014-08-06       Impact factor: 4.592

Review 10.  Cytokines in Sjögren's syndrome.

Authors:  N Roescher; P P Tak; G G Illei
Journal:  Oral Dis       Date:  2009-06-10       Impact factor: 3.511

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.