Literature DB >> 21960768

Comparison of N-linked Glycoproteins in Human Whole Saliva, Parotid, Submandibular, and Sublingual Glandular Secretions Identified using Hydrazide Chemistry and Mass Spectrometry.

Prasanna Ramachandran1, Pinmanee Boontheung, Eric Pang, Weihong Yan, David T Wong, Joseph A Loo.   

Abstract

INTRODUCTION: Saliva is a body fluid that holds promise for use as a diagnostic fluid for detecting diseases. Salivary proteins are known to be heavily glycosylated and are known to play functional roles in the oral cavity. We identified N-linked glycoproteins in human whole saliva, as well as the N-glycoproteins in parotid, submandibular, and sublingual glandular fluids.
MATERIALS AND METHODS: We employed hydrazide chemistry to affinity enrich for N-linked glycoproteins and glycopeptides. PNGase F releases the N-peptides/proteins from the agarose-hydrazide resin, and liquid chromatography-tandem mass spectrometry was used to identify the salivary N-glycoproteins.
RESULTS: A total of 156 formerly N-glycosylated peptides representing 77 unique N-glycoproteins were identified in salivary fluids. The total number of N-glycoproteins identified in the individual fluids was: 62, 34, 44, and 53 in whole saliva, parotid fluid, submandibular fluid, and sublingual fluid, respectively. The majority of the N-glycoproteins were annotated as extracellular proteins (40%), and several of the N-glycoproteins were annotated as membrane proteins (14%). A number of glycoproteins were differentially found in submandibular and sublingual glandular secretions.
CONCLUSIONS: Mapping the N-glycoproteome of parotid, submandibular, and sublingual saliva is important for a thorough understanding of biological processes occurring in the oral cavity and to realize the role of saliva in the overall health of human individuals. Moreover, identifying glycoproteins in saliva may also be valuable for future disease biomarker studies.

Entities:  

Year:  2008        PMID: 21960768      PMCID: PMC3181208          DOI: 10.1007/s12014-008-9005-0

Source DB:  PubMed          Journal:  Clin Proteomics        ISSN: 1542-6416            Impact factor:   3.988


  79 in total

1.  Lectin affinity capture, isotope-coded tagging and mass spectrometry to identify N-linked glycoproteins.

Authors:  Hiroyuki Kaji; Haruna Saito; Yoshio Yamauchi; Takashi Shinkawa; Masato Taoka; Jun Hirabayashi; Ken-ichi Kasai; Nobuhiro Takahashi; Toshiaki Isobe
Journal:  Nat Biotechnol       Date:  2003-05-18       Impact factor: 54.908

Review 2.  Cell surface biology mediated by low affinity multivalent protein-glycan interactions.

Authors:  Brian E Collins; James C Paulson
Journal:  Curr Opin Chem Biol       Date:  2004-12       Impact factor: 8.822

3.  The product of the human c-erbB-2 gene: a 185-kilodalton glycoprotein with tyrosine kinase activity.

Authors:  T Akiyama; C Sudo; H Ogawara; K Toyoshima; T Yamamoto
Journal:  Science       Date:  1986-06-27       Impact factor: 47.728

4.  A novel system of human submandibular/sublingual saliva collection.

Authors:  A Wolff; A Begleiter; D Moskona
Journal:  J Dent Res       Date:  1997-11       Impact factor: 6.116

5.  Identification of N-linked glycoproteins in human saliva by glycoprotein capture and mass spectrometry.

Authors:  Prasanna Ramachandran; Pinmannee Boontheung; Yongming Xie; Melissa Sondej; David T Wong; Joseph A Loo
Journal:  J Proteome Res       Date:  2006-06       Impact factor: 4.466

Review 6.  Altered glycosylation of proteins produced by malignant cells, and application for the diagnosis and immunotherapy of tumours.

Authors:  Akira Kobata; Junko Amano
Journal:  Immunol Cell Biol       Date:  2005-08       Impact factor: 5.126

7.  Serum and salivary neopterin and interferon-gamma in primary Sjögren's syndrome. Correlation with clinical, laboratory and histopathologic features.

Authors:  Paolo Sfriso; PieraAtonio Ostuni; Cotantino Botsios; Marilisa Andretta; Francesca Oliviero; Leonardo Punzi; Silvano Todesco
Journal:  Scand J Rheumatol       Date:  2003       Impact factor: 3.641

8.  A new strategy for identification of N-glycosylated proteins and unambiguous assignment of their glycosylation sites using HILIC enrichment and partial deglycosylation.

Authors:  Per Hägglund; Jakob Bunkenborg; Felix Elortza; Ole Nørregaard Jensen; Peter Roepstorff
Journal:  J Proteome Res       Date:  2004 May-Jun       Impact factor: 4.466

9.  Serum and salivary CEA and GICA levels in oral cavity tumours.

Authors:  L Negri; D Pacchioni; F Calabrese; S Giacomasso; V Mastromatteo; M Fazio
Journal:  Int J Biol Markers       Date:  1988 Apr-Jun       Impact factor: 2.659

10.  An enzymatic deglycosylation scheme enabling identification of core fucosylated N-glycans and O-glycosylation site mapping of human plasma proteins.

Authors:  Per Hägglund; Rune Matthiesen; Felix Elortza; Peter Højrup; Peter Roepstorff; Ole Nørregaard Jensen; Jakob Bunkenborg
Journal:  J Proteome Res       Date:  2007-07-18       Impact factor: 4.466

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  15 in total

1.  Characterization of the human submandibular/sublingual saliva glycoproteome using lectin affinity chromatography coupled to multidimensional protein identification technology.

Authors:  Mireya Gonzalez-Begne; Bingwen Lu; Lujian Liao; Tao Xu; Gurrinder Bedi; James E Melvin; John R Yates
Journal:  J Proteome Res       Date:  2011-10-13       Impact factor: 4.466

Review 2.  Comparative human salivary and plasma proteomes.

Authors:  J A Loo; W Yan; P Ramachandran; D T Wong
Journal:  J Dent Res       Date:  2010-08-25       Impact factor: 6.116

3.  Proteomic profile of saliva collected directly from ducts: a systematic review.

Authors:  Camilla Vieira Esteves; Wladimir Gushiken de Campos; Juliana Amorim Dos Santos; Solange Kobayashi Velasco; Eliete Neves Silva Guerra; Walter L Siqueira; Celso Augusto Lemos
Journal:  Clin Oral Investig       Date:  2019-12-12       Impact factor: 3.573

4.  Hexapeptide libraries for enhanced protein PTM identification and relative abundance profiling in whole human saliva.

Authors:  Sricharan Bandhakavi; Susan K Van Riper; Pierre N Tawfik; Matthew D Stone; Tufia Haddad; Nelson L Rhodus; John V Carlis; Timothy J Griffin
Journal:  J Proteome Res       Date:  2011-01-14       Impact factor: 4.466

5.  Presence of BPIFB1 in saliva from non-obese diabetic mice.

Authors:  Tomoko Nashida; Junko Shimomura-Kuroki; Fumi Mizuhashi; Maiko Haga-Tsujimura; Ken Yoshimura; Sachiko Hayashi-Sakai
Journal:  Odontology       Date:  2017-07-26       Impact factor: 2.634

6.  Relation of Serum and Salivary Total Sialic Acid and Total Sialic Acid/Total Protein Ratio with Clinical Parameters of Disease Progression in Preeclampsia.

Authors:  Jyothi M P D'souza; Vinitha Ramanath Pai; Sindhu Harish; Chitra Shriyan
Journal:  Indian J Clin Biochem       Date:  2021-01-27

7.  Human LPLUNC1 is a secreted product of goblet cells and minor glands of the respiratory and upper aerodigestive tracts.

Authors:  Colin D Bingle; Kirsty Wilson; Hayley Lunn; Frances A Barnes; Alec S High; William A Wallace; Doris Rassl; Michael A Campos; Manuel Ribeiro; Lynne Bingle
Journal:  Histochem Cell Biol       Date:  2010-03-18       Impact factor: 4.304

8.  Mapping human N-linked glycoproteins and glycosylation sites using mass spectrometry.

Authors:  Liuyi Dang; Li Jia; Yuan Zhi; Pengfei Li; Ting Zhao; Bojing Zhu; Rongxia Lan; Yingwei Hu; Hui Zhang; Shisheng Sun
Journal:  Trends Analyt Chem       Date:  2019-02-13       Impact factor: 12.296

Review 9.  Protein-centric N-glycoproteomics analysis of membrane and plasma membrane proteins.

Authors:  Bingyun Sun; Leroy Hood
Journal:  J Proteome Res       Date:  2014-05-01       Impact factor: 4.466

10.  Analysis of age and gender associated N-glycoproteome in human whole saliva.

Authors:  Shisheng Sun; Fei Zhao; Qinzhe Wang; Yaogang Zhong; Tanxi Cai; Peng Wu; Fuquan Yang; Zheng Li
Journal:  Clin Proteomics       Date:  2014-06-05       Impact factor: 3.988

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