Literature DB >> 17964262

The transamidosome: a dynamic ribonucleoprotein particle dedicated to prokaryotic tRNA-dependent asparagine biosynthesis.

Marc Bailly1, Mickaël Blaise, Bernard Lorber, Hubert Dominique Becker, Daniel Kern.   

Abstract

Asparagine, one of the 22 genetically encoded amino acids, can be synthesized by a tRNA-dependent mechanism. So far, this type of pathway was believed to proceed via two independent steps. A nondiscriminating aspartyl-tRNA synthetase (ND-DRS) first generates a mischarged aspartyl-tRNAAsn that dissociates from the enzyme and binds to a tRNA-dependent amidotransferase (AdT), which then converts the tRNA-bound aspartate into asparagine. We show herein that the ND-DRS, tRNAAsn, and AdT assemble into a specific ribonucleoprotein complex called transamidosome that remains stable during the overall catalytic process. Our results indicate that the tRNAAsn-mediated linkage between the ND-DRS and AdT enables channeling of the mischarged aspartyl-tRNAAsn intermediate between DRS and AdT active sites to prevent challenging of the genetic code integrity. We propose that formation of a ribonucleoprotein is a general feature for tRNA-dependent amino acid biosynthetic pathways that are remnants of earlier stages when amino acid synthesis and tRNA aminoacylation were coupled.

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Year:  2007        PMID: 17964262     DOI: 10.1016/j.molcel.2007.08.017

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  41 in total

1.  Control of catalytic cycle by a pair of analogous tRNA modification enzymes.

Authors:  Thomas Christian; Georges Lahoud; Cuiping Liu; Ya-Ming Hou
Journal:  J Mol Biol       Date:  2010-05-07       Impact factor: 5.469

2.  Plasmodium Apicoplast Gln-tRNAGln Biosynthesis Utilizes a Unique GatAB Amidotransferase Essential for Erythrocytic Stage Parasites.

Authors:  Boniface M Mailu; Ling Li; Jen Arthur; Todd M Nelson; Gowthaman Ramasamy; Karin Fritz-Wolf; Katja Becker; Malcolm J Gardner
Journal:  J Biol Chem       Date:  2015-08-28       Impact factor: 5.157

Review 3.  Aminoacyl-tRNA synthetase complexes: molecular multitasking revealed.

Authors:  Corinne D Hausmann; Michael Ibba
Journal:  FEMS Microbiol Rev       Date:  2008-06-03       Impact factor: 16.408

Review 4.  Non-canonical roles of tRNAs and tRNA mimics in bacterial cell biology.

Authors:  Assaf Katz; Sara Elgamal; Andrei Rajkovic; Michael Ibba
Journal:  Mol Microbiol       Date:  2016-06-28       Impact factor: 3.501

5.  A tRNA-independent mechanism for transamidosome assembly promotes aminoacyl-tRNA transamidation.

Authors:  Gayathri N Silva; Shirin Fatma; Ashley M Floyd; Frederic Fischer; Pitak Chuawong; Amanda N Cruz; Rachel M Simari; Nilesh Joshi; Daniel Kern; Tamara L Hendrickson
Journal:  J Biol Chem       Date:  2012-12-20       Impact factor: 5.157

Review 6.  Distinct genetic code expansion strategies for selenocysteine and pyrrolysine are reflected in different aminoacyl-tRNA formation systems.

Authors:  Jing Yuan; Patrick O'Donoghue; Alex Ambrogelly; Sarath Gundllapalli; R Lynn Sherrer; Sotiria Palioura; Miljan Simonović; Dieter Söll
Journal:  FEBS Lett       Date:  2010-01-21       Impact factor: 4.124

Review 7.  tRNAs: cellular barcodes for amino acids.

Authors:  Rajat Banerjee; Shawn Chen; Kiley Dare; Marla Gilreath; Mette Praetorius-Ibba; Medha Raina; Noah M Reynolds; Theresa Rogers; Hervé Roy; Srujana S Yadavalli; Michael Ibba
Journal:  FEBS Lett       Date:  2010-01-21       Impact factor: 4.124

8.  The essential mycobacterial amidotransferase GatCAB is a modulator of specific translational fidelity.

Authors:  Hong-Wei Su; Jun-Hao Zhu; Hao Li; Rong-Jun Cai; Christopher Ealand; Xun Wang; Yu-Xiang Chen; Masood Ur Rehman Kayani; Ting F Zhu; Danesh Moradigaravand; Hairong Huang; Bavesh D Kana; Babak Javid
Journal:  Nat Microbiol       Date:  2016-08-26       Impact factor: 17.745

9.  The archaeal transamidosome for RNA-dependent glutamine biosynthesis.

Authors:  Theodoros Rampias; Kelly Sheppard; Dieter Söll
Journal:  Nucleic Acids Res       Date:  2010-05-10       Impact factor: 16.971

10.  Two distinct regions in Staphylococcus aureus GatCAB guarantee accurate tRNA recognition.

Authors:  Akiyoshi Nakamura; Kelly Sheppard; Junji Yamane; Min Yao; Dieter Söll; Isao Tanaka
Journal:  Nucleic Acids Res       Date:  2009-11-11       Impact factor: 16.971

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