Literature DB >> 17934475

Phosphorothioation of DNA in bacteria by dnd genes.

Lianrong Wang1, Shi Chen, Tiegang Xu, Koli Taghizadeh, John S Wishnok, Xiufen Zhou, Delin You, Zixin Deng, Peter C Dedon.   

Abstract

Modifications of the canonical structures of DNA and RNA play critical roles in cell physiology, DNA replication, transcription and translation in all organisms. We now report that bacterial dnd gene clusters incorporate sulfur into the DNA backbone as a sequence-selective, stereospecific phosphorothioate modification. To our knowledge, unlike any other DNA or RNA modification systems, DNA phosphorothioation by dnd gene clusters is the first physiological modification described on the DNA backbone.

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Year:  2007        PMID: 17934475     DOI: 10.1038/nchembio.2007.39

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  95 in total

1.  Structural insights into DndE from Escherichia coli B7A involved in DNA phosphorothioation modification.

Authors:  Wei Hu; Chengkun Wang; Jingdan Liang; Tianlong Zhang; Zhongpei Hu; Zhijun Wang; Wenxian Lan; Fang Li; Houming Wu; Jianping Ding; Geng Wu; Zixin Deng; Chunyang Cao
Journal:  Cell Res       Date:  2012-04-24       Impact factor: 25.617

2.  Comparison of large-insert, small-insert and pyrosequencing libraries for metagenomic analysis.

Authors:  Thomas Danhorn; Curtis R Young; Edward F DeLong
Journal:  ISME J       Date:  2012-04-26       Impact factor: 10.302

3.  Quantification of the 2-deoxyribonolactone and nucleoside 5'-aldehyde products of 2-deoxyribose oxidation in DNA and cells by isotope-dilution gas chromatography mass spectrometry: differential effects of gamma-radiation and Fe2+-EDTA.

Authors:  Wan Chan; Bingzi Chen; Lianrong Wang; Koli Taghizadeh; Michael S Demott; Peter C Dedon
Journal:  J Am Chem Soc       Date:  2010-05-05       Impact factor: 15.419

Review 4.  Twenty years hunting for sulfur in DNA.

Authors:  Shi Chen; Lianrong Wang; Zixin Deng
Journal:  Protein Cell       Date:  2010-02-07       Impact factor: 14.870

5.  The cysteine dioxygenase homologue from Pseudomonas aeruginosa is a 3-mercaptopropionate dioxygenase.

Authors:  Egor P Tchesnokov; Matthias Fellner; Eleni Siakkou; Torsten Kleffmann; Lois W Martin; Sekotilani Aloi; Iain L Lamont; Sigurd M Wilbanks; Guy N L Jameson
Journal:  J Biol Chem       Date:  2015-08-13       Impact factor: 5.157

6.  Convergence of DNA methylation and phosphorothioation epigenetics in bacterial genomes.

Authors:  Chao Chen; Lianrong Wang; Si Chen; Xiaolin Wu; Meijia Gu; Xi Chen; Susu Jiang; Yunfu Wang; Zixin Deng; Peter C Dedon; Shi Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-11       Impact factor: 11.205

7.  DNA phosphorothioation is widespread and quantized in bacterial genomes.

Authors:  Lianrong Wang; Shi Chen; Kevin L Vergin; Stephen J Giovannoni; Simon W Chan; Michael S DeMott; Koli Taghizadeh; Otto X Cordero; Michael Cutler; Sonia Timberlake; Eric J Alm; Martin F Polz; Jarone Pinhassi; Zixin Deng; Peter C Dedon
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-01       Impact factor: 11.205

8.  Formation of S-Cl phosphorothioate adduct radicals in dsDNA S-oligomers: hole transfer to guanine vs disulfide anion radical formation.

Authors:  Amitava Adhikary; Anil Kumar; Brian J Palmer; Andrew D Todd; Michael D Sevilla
Journal:  J Am Chem Soc       Date:  2013-08-14       Impact factor: 15.419

9.  Regioselectivity of the oxidative C-S bond formation in ergothioneine and ovothiol biosyntheses.

Authors:  Heng Song; Maureen Leninger; Norman Lee; Pinghua Liu
Journal:  Org Lett       Date:  2013-09-09       Impact factor: 6.005

10.  Use of a Tyrosine Analogue To Modulate the Two Activities of a Nonheme Iron Enzyme OvoA in Ovothiol Biosynthesis, Cysteine Oxidation versus Oxidative C-S Bond Formation.

Authors:  Li Chen; Nathchar Naowarojna; Heng Song; Shu Wang; Jiangyun Wang; Zixin Deng; Changming Zhao; Pinghua Liu
Journal:  J Am Chem Soc       Date:  2018-03-21       Impact factor: 15.419

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