Literature DB >> 17917874

Mutation as a stress response and the regulation of evolvability.

Rodrigo S Galhardo1, P J Hastings, Susan M Rosenberg.   

Abstract

Our concept of a stable genome is evolving to one in which genomes are plastic and responsive to environmental changes. Growing evidence shows that a variety of environmental stresses induce genomic instability in bacteria, yeast, and human cancer cells, generating occasional fitter mutants and potentially accelerating adaptive evolution. The emerging molecular mechanisms of stress-induced mutagenesis vary but share telling common components that underscore two common themes. The first is the regulation of mutagenesis in time by cellular stress responses, which promote random mutations specifically when cells are poorly adapted to their environments, i.e., when they are stressed. A second theme is the possible restriction of random mutagenesis in genomic space, achieved via coupling of mutation-generating machinery to local events such as DNA-break repair or transcription. Such localization may minimize accumulation of deleterious mutations in the genomes of rare fitter mutants, and promote local concerted evolution. Although mutagenesis induced by stresses other than direct damage to DNA was previously controversial, evidence for the existence of various stress-induced mutagenesis programs is now overwhelming and widespread. Such mechanisms probably fuel evolution of microbial pathogenesis and antibiotic-resistance, and tumor progression and chemotherapy resistance, all of which occur under stress, driven by mutations. The emerging commonalities in stress-induced-mutation mechanisms provide hope for new therapeutic interventions for all of these processes.

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Year:  2007        PMID: 17917874      PMCID: PMC3319127          DOI: 10.1080/10409230701648502

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  197 in total

Review 1.  Illusory defects and mismatches: why must DNA repair always be (slightly) error prone?

Authors:  J Ninio
Journal:  Bioessays       Date:  2000-04       Impact factor: 4.345

2.  The SOS response regulates adaptive mutation.

Authors:  G J McKenzie; R S Harris; P L Lee; S M Rosenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

3.  Adaptive amplification: an inducible chromosomal instability mechanism.

Authors:  P J Hastings; H J Bull; J R Klump; S M Rosenberg
Journal:  Cell       Date:  2000-11-22       Impact factor: 41.582

4.  The significance of responses of the genome to challenge.

Authors:  B McClintock
Journal:  Science       Date:  1984-11-16       Impact factor: 47.728

5.  The global regulator H-NS acts directly on the transpososome to promote Tn10 transposition.

Authors:  Simon J Wardle; Michelle O'Carroll; Keith M Derbyshire; David B Haniford
Journal:  Genes Dev       Date:  2005-09-15       Impact factor: 11.361

6.  Involvement of Escherichia coli DNA polymerase IV in tolerance of cytotoxic alkylating DNA lesions in vivo.

Authors:  Ivana Bjedov; Chitralekha Nag Dasgupta; Dea Slade; Sophie Le Blastier; Marjorie Selva; Ivan Matic
Journal:  Genetics       Date:  2007-05-04       Impact factor: 4.562

7.  Selection-induced mutations occur in yeast.

Authors:  B G Hall
Journal:  Proc Natl Acad Sci U S A       Date:  1992-05-15       Impact factor: 11.205

8.  Adaptive reversion of a frameshift mutation in Escherichia coli by simple base deletions in homopolymeric runs.

Authors:  P L Foster; J M Trimarchi
Journal:  Science       Date:  1994-07-15       Impact factor: 47.728

9.  Different spectra of stationary-phase mutations in early-arising versus late-arising mutants of Pseudomonas putida: involvement of the DNA repair enzyme MutY and the stationary-phase sigma factor RpoS.

Authors:  Signe Saumaa; Andres Tover; Lagle Kasak; Maia Kivisaar
Journal:  J Bacteriol       Date:  2002-12       Impact factor: 3.490

10.  On the mechanism of gene amplification induced under stress in Escherichia coli.

Authors:  Andrew Slack; P C Thornton; Daniel B Magner; Susan M Rosenberg; P J Hastings
Journal:  PLoS Genet       Date:  2006-04-07       Impact factor: 5.917

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  233 in total

1.  Transcriptional de-repression and Mfd are mutagenic in stressed Bacillus subtilis cells.

Authors:  Holly Anne Martin; Mario Pedraza-Reyes; Ronald E Yasbin; Eduardo A Robleto
Journal:  J Mol Microbiol Biotechnol       Date:  2012-01-13

Review 2.  Stress-induced modulators of repeat instability and genome evolution.

Authors:  Natalie C Fonville; R Matthew Ward; David Mittelman
Journal:  J Mol Microbiol Biotechnol       Date:  2012-01-13

3.  Mismatch repair-dependent mutagenesis in nondividing cells.

Authors:  Gina P Rodriguez; Nina V Romanova; Gaobin Bao; N Cynthia Rouf; Yoke Wah Kow; Gray F Crouse
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-02       Impact factor: 11.205

4.  Messy biology and the origins of evolutionary innovations.

Authors:  Dan S Tawfik
Journal:  Nat Chem Biol       Date:  2010-10       Impact factor: 15.040

5.  Separate DNA Pol II- and Pol IV-dependent pathways of stress-induced mutation during double-strand-break repair in Escherichia coli are controlled by RpoS.

Authors:  Ryan L Frisch; Yang Su; P C Thornton; Janet L Gibson; Susan M Rosenberg; P J Hastings
Journal:  J Bacteriol       Date:  2010-07-16       Impact factor: 3.490

6.  Transcription-associated mutation in Bacillus subtilis cells under stress.

Authors:  Christine Pybus; Mario Pedraza-Reyes; Christian A Ross; Holly Martin; Katherine Ona; Ronald E Yasbin; Eduardo Robleto
Journal:  J Bacteriol       Date:  2010-04-30       Impact factor: 3.490

Review 7.  Essential biological processes of an emerging pathogen: DNA replication, transcription, and cell division in Acinetobacter spp.

Authors:  Andrew Robinson; Anthony J Brzoska; Kylie M Turner; Ryan Withers; Elizabeth J Harry; Peter J Lewis; Nicholas E Dixon
Journal:  Microbiol Mol Biol Rev       Date:  2010-06       Impact factor: 11.056

8.  Stress, genomes, and evolution.

Authors:  David Mittelman; John H Wilson
Journal:  Cell Stress Chaperones       Date:  2010-06-04       Impact factor: 3.667

9.  New mutations and intellectual function.

Authors:  James R Lupski
Journal:  Nat Genet       Date:  2010-12       Impact factor: 38.330

10.  Antibiotics and UV radiation induce competence for natural transformation in Legionella pneumophila.

Authors:  Xavier Charpentier; Elisabeth Kay; Dominique Schneider; Howard A Shuman
Journal:  J Bacteriol       Date:  2010-12-17       Impact factor: 3.490

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