Literature DB >> 17917669

Target deconvolution strategies in drug discovery.

Georg C Terstappen1, Christina Schlüpen, Roberto Raggiaschi, Giovanni Gaviraghi.   

Abstract

Recognition of some of the limitations of target-based drug discovery has recently led to the renaissance of a more holistic approach in which complex biological systems are investigated for phenotypic changes upon exposure to small molecules. The subsequent identification of the molecular targets that underlie an observed phenotypic response--termed target deconvolution--is an important aspect of current drug discovery, as knowledge of the molecular targets will greatly aid drug development. Here, the broad panel of experimental strategies that can be applied to target deconvolution is critically reviewed.

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Year:  2007        PMID: 17917669     DOI: 10.1038/nrd2410

Source DB:  PubMed          Journal:  Nat Rev Drug Discov        ISSN: 1474-1776            Impact factor:   84.694


  102 in total

1.  Target identification by chromatographic co-elution: monitoring of drug-protein interactions without immobilization or chemical derivatization.

Authors:  Janet N Y Chan; Dajana Vuckovic; Lekha Sleno; Jonathan B Olsen; Oxana Pogoutse; Pierre Havugimana; Johannes A Hewel; Navgeet Bajaj; Yale Wang; Marcel F Musteata; Corey Nislow; Andrew Emili
Journal:  Mol Cell Proteomics       Date:  2012-02-22       Impact factor: 5.911

2.  7th annual European Antibody Congress 2011: November 29-December 1, 2011, Geneva, Switzerland.

Authors:  Alexey A Lugovskoy; Janice M Reichert; Alain Beck
Journal:  MAbs       Date:  2012-03-01       Impact factor: 5.857

3.  Simplified proteomics approach to discover protein-ligand interactions.

Authors:  Youngil Chang; Jonathan P Schlebach; Ross A VerHeul; Chiwook Park
Journal:  Protein Sci       Date:  2012-07-23       Impact factor: 6.725

4.  Discovery of drug mode of action and drug repositioning from transcriptional responses.

Authors:  Francesco Iorio; Roberta Bosotti; Emanuela Scacheri; Vincenzo Belcastro; Pratibha Mithbaokar; Rosa Ferriero; Loredana Murino; Roberto Tagliaferri; Nicola Brunetti-Pierri; Antonella Isacchi; Diego di Bernardo
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-02       Impact factor: 11.205

Review 5.  Natural products as chemical probes.

Authors:  Erin E Carlson
Journal:  ACS Chem Biol       Date:  2010-07-16       Impact factor: 5.100

Review 6.  Natural product discovery: past, present, and future.

Authors:  Leonard Katz; Richard H Baltz
Journal:  J Ind Microbiol Biotechnol       Date:  2016-01-06       Impact factor: 3.346

7.  Advances in Nuclear Magnetic Resonance for Drug Discovery.

Authors:  Robert Powers
Journal:  Expert Opin Drug Discov       Date:  2009-10-01       Impact factor: 6.098

8.  Identifying the proteins to which small-molecule probes and drugs bind in cells.

Authors:  Shao-En Ong; Monica Schenone; Adam A Margolin; Xiaoyu Li; Kathy Do; Mary K Doud; D R Mani; Letian Kuai; Xiang Wang; John L Wood; Nicola J Tolliday; Angela N Koehler; Lisa A Marcaurelle; Todd R Golub; Robert J Gould; Stuart L Schreiber; Steven A Carr
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-02       Impact factor: 11.205

9.  UV-triggered affinity capture identifies interactions between the Plasmodium falciparum multidrug resistance protein 1 (PfMDR1) and antimalarial agents in live parasitized cells.

Authors:  Ralf Brunner; Caroline L Ng; Hamed Aissaoui; Myles H Akabas; Christoph Boss; Reto Brun; Paul S Callaghan; Olivier Corminboeuf; David A Fidock; Ithiel J Frame; Bibia Heidmann; Amélie Le Bihan; Paul Jenö; Corinna Mattheis; Suzette Moes; Ingrid B Müller; Michelle Paguio; Paul D Roepe; Romain Siegrist; Till Voss; Richard W D Welford; Sergio Wittlin; Christoph Binkert
Journal:  J Biol Chem       Date:  2013-06-10       Impact factor: 5.157

10.  Small molecule screen for compounds that affect vascular development in the zebrafish retina.

Authors:  Satish S Kitambi; Kyle J McCulloch; Randall T Peterson; Jarema J Malicki
Journal:  Mech Dev       Date:  2009 May-Jun       Impact factor: 1.882

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