Literature DB >> 17881572

Metabolic rate does not calibrate the molecular clock.

Robert Lanfear1, Jessica A Thomas, John J Welch, Thomas Brey, Lindell Bromham.   

Abstract

Rates of molecular evolution vary widely among lineages, but the causes of this variation remain poorly understood. It has been suggested that mass-specific metabolic rate may be one of the key factors determining the rate of molecular evolution, and that it can be used to derive "corrected" molecular clocks. However, previous studies have been hampered by a paucity of mass-specific metabolic rate data and have been largely limited to vertebrate taxa. Using mass-specific metabolic rate measurements and DNA sequence data for >300 metazoan species for 12 different genes, we find no evidence that mass-specific metabolic rate drives substitution rates. The mechanistic basis of the metabolic rate hypothesis is discussed in light of these findings.

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Year:  2007        PMID: 17881572      PMCID: PMC2000532          DOI: 10.1073/pnas.0703359104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

1.  The power of relative rates tests depends on the data.

Authors:  L Bromham; D Penny; A Rambaut; M D Hendy
Journal:  J Mol Evol       Date:  2000-03       Impact factor: 2.395

Review 2.  The evolution of mutation rates: separating causes from consequences.

Authors:  P D Sniegowski; P J Gerrish; T Johnson; A Shaver
Journal:  Bioessays       Date:  2000-12       Impact factor: 4.345

3.  Effects of size and temperature on metabolic rate.

Authors:  J F Gillooly; J H Brown; G B West; V M Savage; E L Charnov
Journal:  Science       Date:  2001-09-21       Impact factor: 47.728

4.  Extensive variation in evolutionary rate of rbcL gene sequences among seed plants.

Authors:  J Bousquet; S H Strauss; A H Doerksen; R A Price
Journal:  Proc Natl Acad Sci U S A       Date:  1992-08-15       Impact factor: 11.205

5.  The rate of DNA evolution: effects of body size and temperature on the molecular clock.

Authors:  James F Gillooly; Andrew P Allen; Geoffrey B West; James H Brown
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-23       Impact factor: 11.205

Review 6.  Beyond the '3/4-power law': variation in the intra- and interspecific scaling of metabolic rate in animals.

Authors:  Douglas S Glazier
Journal:  Biol Rev Camb Philos Soc       Date:  2005-11

Review 7.  Body size, energy metabolism and lifespan.

Authors:  John R Speakman
Journal:  J Exp Biol       Date:  2005-05       Impact factor: 3.312

8.  There is no universal molecular clock for invertebrates, but rate variation does not scale with body size.

Authors:  Jessica A Thomas; John J Welch; Megan Woolfit; Lindell Bromham
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-01       Impact factor: 11.205

9.  Phenotypic plasticity in the scaling of avian basal metabolic rate.

Authors:  Andrew E McKechnie; Robert P Freckleton; Walter Jetz
Journal:  Proc Biol Sci       Date:  2006-04-22       Impact factor: 5.349

Review 10.  Mitochondrial oxygen radical generation and leak: sites of production in states 4 and 3, organ specificity, and relation to aging and longevity.

Authors:  G Barja
Journal:  J Bioenerg Biomembr       Date:  1999-08       Impact factor: 2.945

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  34 in total

1.  Mutation rate is linked to diversification in birds.

Authors:  Robert Lanfear; Simon Y W Ho; Dominic Love; Lindell Bromham
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-08       Impact factor: 11.205

Review 2.  Why do species vary in their rate of molecular evolution?

Authors:  Lindell Bromham
Journal:  Biol Lett       Date:  2009-04-08       Impact factor: 3.703

3.  Mitochondrial whims: metabolic rate, longevity and the rate of molecular evolution.

Authors:  Nicolas Galtier; Richard W Jobson; Benoît Nabholz; Sylvain Glémin; Pierre U Blier
Journal:  Biol Lett       Date:  2009-03-04       Impact factor: 3.703

4.  An examination of phylogenetic models of substitution rate variation among lineages.

Authors:  Simon Y W Ho
Journal:  Biol Lett       Date:  2009-02-25       Impact factor: 3.703

5.  Taller plants have lower rates of molecular evolution.

Authors:  Robert Lanfear; Simon Y W Ho; T Jonathan Davies; Angela T Moles; Lonnie Aarssen; Nathan G Swenson; Laura Warman; Amy E Zanne; Andrew P Allen
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

6.  Latitude, elevation and the tempo of molecular evolution in mammals.

Authors:  Len N Gillman; D Jeanette Keeling; Howard A Ross; Shane D Wright
Journal:  Proc Biol Sci       Date:  2009-06-25       Impact factor: 5.349

7.  Age at first reproduction explains rate variation in the strepsirrhine molecular clock.

Authors:  C Tsantes; M E Steiper
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-19       Impact factor: 11.205

8.  Evolutionary rates in Veronica L. (Plantaginaceae): disentangling the influence of life history and breeding system.

Authors:  Kai Müller; Dirk C Albach
Journal:  J Mol Evol       Date:  2009-12-19       Impact factor: 2.395

Review 9.  Molecular evolution and the latitudinal biodiversity gradient.

Authors:  E J Dowle; M Morgan-Richards; S A Trewick
Journal:  Heredity (Edinb)       Date:  2013-03-13       Impact factor: 3.821

10.  Testing the effect of metabolic rate on DNA variability at the intra-specific level.

Authors:  Angela McGaughran; Barbara R Holland
Journal:  PLoS One       Date:  2010-03-15       Impact factor: 3.240

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