Literature DB >> 17881543

Preliminary evaluation of a multiplex reverse transcription-PCR assay combined with a new DNA chip hybridization assay for detecting respiratory syncytial virus.

Manuel Causse1, Angel D García-Mayorgas, Juan B Gutiérrez, Manuel Casal.   

Abstract

DNA chips represent a major advance in microbiology laboratories, enabling the detection of a wide range of possible pathogens using a single test. This study compared a multiplex reverse transcription-PCR combined with DNA chip hybridization (ProDect BCS RV chip; bcs Biotech) with the indirect immunofluorescence test commonly used to detect respiratory viruses. A total of 39 respiratory viruses (38 respiratory syncytial viruses [RSVs] and 1 influenza A virus) were detected in samples from 96 patients using the immunofluorescence test, while 36 viruses (34 RSV, 1 influenza A virus, and 1 influenza B virus) were detected by the DNA chip technique. Results showed a good level of agreement between the two tests for RSV detection; the incidence of other viruses was low, since samples were taken from patients with suspected bronchiolitis. DNA chips displayed high sensitivity (94.6%) and specificity (100%).

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Year:  2007        PMID: 17881543      PMCID: PMC2168492          DOI: 10.1128/JCM.00345-07

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  13 in total

Review 1.  Measuring agreement in method comparison studies.

Authors:  J M Bland; D G Altman
Journal:  Stat Methods Med Res       Date:  1999-06       Impact factor: 3.021

2.  Superiority of reverse-transcription polymerase chain reaction to conventional viral culture in the diagnosis of acute respiratory tract infections in children.

Authors:  Geoffrey A Weinberg; Dean D Erdman; Kathryn M Edwards; Caroline B Hall; Frances J Walker; Marie R Griffin; Benjamin Schwartz
Journal:  J Infect Dis       Date:  2004-02-04       Impact factor: 5.226

3.  Evaluation of Binax NOW RSV as an acute point-of-care screening test in a paediatric accident and emergency unit.

Authors:  P L Mackie; E M McCormick; C Williams
Journal:  Commun Dis Public Health       Date:  2004-12

4.  Comparison of real-time PCR assays with fluorescent-antibody assays for diagnosis of respiratory virus infections in children.

Authors:  Jane Kuypers; Nancy Wright; James Ferrenberg; Meei-Li Huang; Anne Cent; Lawrence Corey; Rhoda Morrow
Journal:  J Clin Microbiol       Date:  2006-07       Impact factor: 5.948

5.  Comparison of direct and indirect immunofluorescence staining of clinical specimens for detection of respiratory syncytial virus antigen.

Authors:  L L Minnich; C G Ray
Journal:  J Clin Microbiol       Date:  1982-05       Impact factor: 5.948

6.  Cost-effectiveness of rapid diagnosis of viral respiratory tract infections in pediatric patients.

Authors:  P C Woo; S S Chiu; W H Seto; M Peiris
Journal:  J Clin Microbiol       Date:  1997-06       Impact factor: 5.948

7.  Use of monoclonal antibodies for rapid diagnosis of respiratory viruses in a community hospital.

Authors:  K E Irmen; J J Kelleher
Journal:  Clin Diagn Lab Immunol       Date:  2000-05

8.  Clinical and financial benefits of rapid detection of respiratory viruses: an outcomes study.

Authors:  J Barenfanger; C Drake; N Leon; T Mueller; T Troutt
Journal:  J Clin Microbiol       Date:  2000-08       Impact factor: 5.948

9.  A sensitive, specific, and cost-effective multiplex reverse transcriptase-PCR assay for the detection of seven common respiratory viruses in respiratory samples.

Authors:  Melanie W Syrmis; David M Whiley; Marion Thomas; Ian M Mackay; Jeanette Williamson; David J Siebert; Michael D Nissen; Theo P Sloots
Journal:  J Mol Diagn       Date:  2004-05       Impact factor: 5.568

10.  Comparison of the "ProDect BCS RV CHIP" assay with the combination of shell vial cell culture and immunofluorescence antibody test for the detection of respiratory viruses.

Authors:  Candan Ciçek; Figen Gülen; Eylem Karataş; Esen Demir; Remziye Tanaç; Feza Bacakoğlu; Altinay Bilgiç
Journal:  J Virol Methods       Date:  2007-04-12       Impact factor: 2.014

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  2 in total

1.  In very young infants severity of acute bronchiolitis depends on carried viruses.

Authors:  Christophe Marguet; Marc Lubrano; Marie Gueudin; Pascal Le Roux; Antoine Deschildre; Chantal Forget; Laure Couderc; Daniel Siret; Marie-Dominique Donnou; Michael Bubenheim; Astrid Vabret; François Freymuth
Journal:  PLoS One       Date:  2009-02-25       Impact factor: 3.240

2.  [Biological markers in acute bronchiolitis: Correlations with gravity and risk factors for asthma].

Authors:  E Legru; O Lees; M Bubenheim; O Boyer; C Marguet
Journal:  J Pediatr Pueric       Date:  2009-06-04
  2 in total

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