Literature DB >> 17873868

Biosynthesis of the earthy odorant geosmin by a bifunctional Streptomyces coelicolor enzyme.

Jiaoyang Jiang1, Xiaofei He, David E Cane.   

Abstract

Geosmin is responsible for the characteristic odor of moist soil, as well as off-flavors in drinking water and foodstuffs. Geosmin is generated from farnesyl diphosphate (FPP, 2) by an enzyme that is encoded by the SCO6073 gene in the soil organism Streptomyces coelicolor A32 (ref. 3). We have now shown that the recombinant N-terminal half of this protein catalyzes the Mg2+-dependent cyclization of FPP to germacradienol and germacrene D, while the highly homologous C-terminal domain, previously thought to be catalytically silent, catalyzes the Mg2+-dependent conversion of germacradienol to geosmin. Site-directed mutagenesis confirmed that the N- and C-terminal domains each harbor a distinct, independently functioning active site. A mutation in the N-terminal domain of germacradienol-geosmin synthase of a catalytically essential serine to alanine results in the conversion of FPP to a mixture of sesquiterpenes that includes an aberrant product identified as isolepidozene, which was previously suggested to be an enzyme-bound intermediate in the cyclization of FPP to germacradienol.

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Year:  2007        PMID: 17873868      PMCID: PMC3013058          DOI: 10.1038/nchembio.2007.29

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  26 in total

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Authors:  T Toyomasu; H Kawaide; A Ishizaki; S Shinoda; M Otsuka; W Mitsuhashi; T Sassa
Journal:  Biosci Biotechnol Biochem       Date:  2000-03       Impact factor: 2.043

2.  Pre-steady-state kinetic analysis of the trichodiene synthase reaction pathway.

Authors:  D E Cane; H T Chiu; P H Liang; K S Anderson
Journal:  Biochemistry       Date:  1997-07-08       Impact factor: 3.162

3.  A gene cluster for biosynthesis of the sesquiterpenoid antibiotic pentalenolactone in Streptomyces avermitilis.

Authors:  Charles N Tetzlaff; Zheng You; David E Cane; Satoshi Takamatsu; Satoshi Omura; Haruo Ikeda
Journal:  Biochemistry       Date:  2006-05-16       Impact factor: 3.162

4.  X-ray crystal structures of D100E trichodiene synthase and its pyrophosphate complex reveal the basis for terpene product diversity.

Authors:  Michael J Rynkiewicz; David E Cane; David W Christianson
Journal:  Biochemistry       Date:  2002-02-12       Impact factor: 3.162

Review 5.  Volatile substances from actinomycetes: their role in the odor pollution of water.

Authors:  N N Gerber
Journal:  CRC Crit Rev Microbiol       Date:  1979-11

6.  Geosmin biosynthesis in Streptomyces avermitilis. Molecular cloning, expression, and mechanistic study of the germacradienol/geosmin synthase.

Authors:  David E Cane; Xiaofei He; Seiji Kobayashi; Satoshi Omura; Haruo Ikeda
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Authors:  C Feil; R Süssmuth; G Jung; K Poralla
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8.  Geosmin and Related Volatiles in Bioreactor-Cultured Streptomyces citreus CBS 109.60.

Authors:  F C Pollak; R G Berger
Journal:  Appl Environ Microbiol       Date:  1996-04       Impact factor: 4.792

9.  Aristolochene synthase: mechanistic analysis of active site residues by site-directed mutagenesis.

Authors:  Brunella Felicetti; David E Cane
Journal:  J Am Chem Soc       Date:  2004-06-16       Impact factor: 15.419

10.  PCR-targeted Streptomyces gene replacement identifies a protein domain needed for biosynthesis of the sesquiterpene soil odor geosmin.

Authors:  Bertolt Gust; Greg L Challis; Kay Fowler; Tobias Kieser; Keith F Chater
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-31       Impact factor: 11.205

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  56 in total

1.  Identification of (8S,9S,10S)-8,10-dimethyl-1-octalin, a key intermediate in the biosynthesis of geosmin in bacteria.

Authors:  Thorben Nawrath; Jeroen S Dickschat; Rolf Müller; Jiaoyang Jiang; David E Cane; Stefan Schulz
Journal:  J Am Chem Soc       Date:  2007-12-21       Impact factor: 15.419

2.  Geosmin biosynthesis. Mechanism of the fragmentation-rearrangement in the conversion of germacradienol to geosmin.

Authors:  Jiaoyang Jiang; David E Cane
Journal:  J Am Chem Soc       Date:  2007-12-21       Impact factor: 15.419

3.  Streptomyces adelaidensis sp. nov., an actinobacterium isolated from the root of Callitris preissii with potential for plant growth-promoting properties.

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Journal:  Arch Microbiol       Date:  2021-04-19       Impact factor: 2.552

4.  Crystal structure of albaflavenone monooxygenase containing a moonlighting terpene synthase active site.

Authors:  Bin Zhao; Li Lei; Dmitry G Vassylyev; Xin Lin; David E Cane; Steven L Kelly; Hang Yuan; David C Lamb; Michael R Waterman
Journal:  J Biol Chem       Date:  2009-10-26       Impact factor: 5.157

Review 5.  Genomic basis for natural product biosynthetic diversity in the actinomycetes.

Authors:  Markus Nett; Haruo Ikeda; Bradley S Moore
Journal:  Nat Prod Rep       Date:  2009-09-01       Impact factor: 13.423

6.  Squalene hopene cyclases are protonases for stereoselective Brønsted acid catalysis.

Authors:  Stephan C Hammer; Antonija Marjanovic; Jörg M Dominicus; Bettina M Nestl; Bernhard Hauer
Journal:  Nat Chem Biol       Date:  2014-12-15       Impact factor: 15.040

Review 7.  Microbial volatile organic compounds in intra-kingdom and inter-kingdom interactions.

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Journal:  Nat Rev Microbiol       Date:  2021-02-01       Impact factor: 60.633

Review 8.  The Enzymology of Organic Transformations: A Survey of Name Reactions in Biological Systems.

Authors:  Chia-I Lin; Reid M McCarty; Hung-Wen Liu
Journal:  Angew Chem Int Ed Engl       Date:  2017-02-14       Impact factor: 15.336

Review 9.  Exploitation of the Streptomyces coelicolor A3(2) genome sequence for discovery of new natural products and biosynthetic pathways.

Authors:  Gregory L Challis
Journal:  J Ind Microbiol Biotechnol       Date:  2013-12-10       Impact factor: 3.346

10.  Biochemistry and molecular genetics of the biosynthesis of the earthy odorant methylisoborneol in Streptomyces coelicolor.

Authors:  Chieh-Mei Wang; David E Cane
Journal:  J Am Chem Soc       Date:  2008-06-19       Impact factor: 15.419

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