Literature DB >> 17827328

Impact of substrate glycoside linkage and elemental sulfur on bioenergetics of and hydrogen production by the hyperthermophilic archaeon Pyrococcus furiosus.

Chung-Jung Chou1, Keith R Shockley, Shannon B Conners, Derrick L Lewis, Donald A Comfort, Michael W W Adams, Robert M Kelly.   

Abstract

Glycoside linkage (cellobiose versus maltose) dramatically influenced bioenergetics to different extents and by different mechanisms in the hyperthermophilic archaeon Pyrococcus furiosus when it was grown in continuous culture at a dilution rate of 0.45 h(-1) at 90 degrees C. In the absence of S(0), cellobiose-grown cells generated twice as much protein and had 50%-higher specific H(2) generation rates than maltose-grown cultures. Addition of S(0) to maltose-grown cultures boosted cell protein production fourfold and shifted gas production completely from H(2) to H(2)S. In contrast, the presence of S(0) in cellobiose-grown cells caused only a 1.3-fold increase in protein production and an incomplete shift from H(2) to H(2)S production, with 2.5 times more H(2) than H(2)S formed. Transcriptional response analysis revealed that many genes and operons known to be involved in alpha- or beta-glucan uptake and processing were up-regulated in an S(0)-independent manner. Most differentially transcribed open reading frames (ORFs) responding to S(0) in cellobiose-grown cells also responded to S(0) in maltose-grown cells; these ORFs included ORFs encoding a membrane-bound oxidoreductase complex (MBX) and two hypothetical proteins (PF2025 and PF2026). However, additional genes (242 genes; 108 genes were up-regulated and 134 genes were down-regulated) were differentially transcribed when S(0) was present in the medium of maltose-grown cells, indicating that there were different cellular responses to the two sugars. These results indicate that carbohydrate characteristics (e.g., glycoside linkage) have a major impact on S(0) metabolism and hydrogen production in P. furiosus. Furthermore, such issues need to be considered in designing and implementing metabolic strategies for production of biofuel by fermentative anaerobes.

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Year:  2007        PMID: 17827328      PMCID: PMC2074980          DOI: 10.1128/AEM.00597-07

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  57 in total

1.  Genetic and biochemical characterization of a short-chain alcohol dehydrogenase from the hyperthermophilic archaeon Pyrococcus furiosus.

Authors:  J van der Oost; W G Voorhorst; S W Kengen; A C Geerling; V Wittenhorst; Y Gueguen; W M de Vos
Journal:  Eur J Biochem       Date:  2001-05

2.  Heat shock response by the hyperthermophilic archaeon Pyrococcus furiosus.

Authors:  Keith R Shockley; Donald E Ward; Swapnil R Chhabra; Shannon B Conners; Clemente I Montero; Robert M Kelly
Journal:  Appl Environ Microbiol       Date:  2003-04       Impact factor: 4.792

3.  Hydrogen production from glucose by anaerobes.

Authors:  Hiroyasu Ogino; Takashi Miura; Kosaku Ishimi; Minoru Seki; Hiroyuki Yoshida
Journal:  Biotechnol Prog       Date:  2005 Nov-Dec

4.  DNA microarray analysis of the hyperthermophilic archaeon Pyrococcus furiosus: evidence for anNew type of sulfur-reducing enzyme complex.

Authors:  G J Schut; J Zhou; M W Adams
Journal:  J Bacteriol       Date:  2001-12       Impact factor: 3.490

5.  The endopolysaccharide metabolism of the hyperthermophilic archeon Thermococcus hydrothermalis: polymer structure and biosynthesis.

Authors:  Sebastien Gruyer; Estelle Legin; Christophe Bliard; Steven Ball; Francis Duchiron
Journal:  Curr Microbiol       Date:  2002-03       Impact factor: 2.188

6.  Enzymes of hydrogen metabolism in Pyrococcus furiosus.

Authors:  P J Silva; E C van den Ban; H Wassink; H Haaker; B de Castro; F T Robb; W R Hagen
Journal:  Eur J Biochem       Date:  2000-11

7.  Hydrogen production by the thermophilic bacterium Thermotoga neapolitana.

Authors:  Suellen A Van Ooteghem; Stephen K Beer; Paul C Yue
Journal:  Appl Biochem Biotechnol       Date:  2002       Impact factor: 2.926

8.  Growth of hyperthermophilic archaeon Pyrococcus furiosus on chitin involves two family 18 chitinases.

Authors:  Jun Gao; Michael W Bauer; Keith R Shockley; Marybeth A Pysz; Robert M Kelly
Journal:  Appl Environ Microbiol       Date:  2003-06       Impact factor: 4.792

Review 9.  Improvement of fermentative hydrogen production: various approaches.

Authors:  Kaushik Nath; Debabrata Das
Journal:  Appl Microbiol Biotechnol       Date:  2004-07-31       Impact factor: 4.813

10.  Whole-genome DNA microarray analysis of a hyperthermophile and an archaeon: Pyrococcus furiosus grown on carbohydrates or peptides.

Authors:  Gerrit J Schut; Scott D Brehm; Susmita Datta; Michael W W Adams
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

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  15 in total

1.  Thermococcus kodakarensis as a host for gene expression and protein secretion.

Authors:  Ryo Takemasa; Yuusuke Yokooji; Atsushi Yamatsu; Haruyuki Atomi; Tadayuki Imanaka
Journal:  Appl Environ Microbiol       Date:  2011-01-28       Impact factor: 4.792

2.  Distinct physiological roles of the three [NiFe]-hydrogenase orthologs in the hyperthermophilic archaeon Thermococcus kodakarensis.

Authors:  Tamotsu Kanai; Ryoji Matsuoka; Haruki Beppu; Akihito Nakajima; Yoshihiro Okada; Haruyuki Atomi; Tadayuki Imanaka
Journal:  J Bacteriol       Date:  2011-04-22       Impact factor: 3.490

3.  Novel multiprotein complexes identified in the hyperthermophilic archaeon Pyrococcus furiosus by non-denaturing fractionation of the native proteome.

Authors:  Angeli Lal Menon; Farris L Poole; Aleksandar Cvetkovic; Sunia A Trauger; Ewa Kalisiak; Joseph W Scott; Saratchandra Shanmukh; Jeremy Praissman; Francis E Jenney; William R Wikoff; John V Apon; Gary Siuzdak; Michael W W Adams
Journal:  Mol Cell Proteomics       Date:  2008-11-28       Impact factor: 5.911

4.  Impact of growth mode, phase, and rate on the metabolic state of the extremely thermophilic archaeon Pyrococcus furiosus.

Authors:  Piyum A Khatibi; Chung-Jung Chou; Andrew J Loder; Jeffrey V Zurawski; Michael W W Adams; Robert M Kelly
Journal:  Biotechnol Bioeng       Date:  2017-10-06       Impact factor: 4.530

5.  Deletion of alternative pathways for reductant recycling in Thermococcus kodakarensis increases hydrogen production.

Authors:  Thomas J Santangelo; L'ubomíra Cuboňová; John N Reeve
Journal:  Mol Microbiol       Date:  2011-07-13       Impact factor: 3.501

6.  Production of hydrogen from α-1,4- and β-1,4-linked saccharides by marine hyperthermophilic Archaea.

Authors:  Daniel M Oslowski; Jong-Hyun Jung; Dong-Ho Seo; Cheon-Seok Park; James F Holden
Journal:  Appl Environ Microbiol       Date:  2011-03-18       Impact factor: 4.792

7.  A mutant ('lab strain') of the hyperthermophilic archaeon Pyrococcus furiosus, lacking flagella, has unusual growth physiology.

Authors:  Derrick L Lewis; Jaspreet S Notey; Sanjeev K Chandrayan; Andrew J Loder; Gina L Lipscomb; Michael W W Adams; Robert M Kelly
Journal:  Extremophiles       Date:  2014-12-04       Impact factor: 2.395

8.  The genus Thermotoga: recent developments.

Authors:  Andrew D Frock; Jaspreet S Notey; Robert M Kelly
Journal:  Environ Technol       Date:  2010-09       Impact factor: 3.247

9.  Genome-wide transcriptional response of the archaeon Thermococcus gammatolerans to cadmium.

Authors:  Arnaud Lagorce; Aude Fourçans; Murielle Dutertre; Brice Bouyssiere; Yvan Zivanovic; Fabrice Confalonieri
Journal:  PLoS One       Date:  2012-07-27       Impact factor: 3.240

10.  Linking genome content to biofuel production yields: a meta-analysis of major catabolic pathways among select H2 and ethanol-producing bacteria.

Authors:  Carlo R Carere; Thomas Rydzak; Tobin J Verbeke; Nazim Cicek; David B Levin; Richard Sparling
Journal:  BMC Microbiol       Date:  2012-12-18       Impact factor: 3.605

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