Literature DB >> 17823352

The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization.

Christina A Cuomo1, Ulrich Güldener, Jin-Rong Xu, Frances Trail, B Gillian Turgeon, Antonio Di Pietro, Jonathan D Walton, Li-Jun Ma, Scott E Baker, Martijn Rep, Gerhard Adam, John Antoniw, Thomas Baldwin, Sarah Calvo, Yueh-Long Chang, David Decaprio, Liane R Gale, Sante Gnerre, Rubella S Goswami, Kim Hammond-Kosack, Linda J Harris, Karen Hilburn, John C Kennell, Scott Kroken, Jon K Magnuson, Gertrud Mannhaupt, Evan Mauceli, Hans-Werner Mewes, Rudolf Mitterbauer, Gary Muehlbauer, Martin Münsterkötter, David Nelson, Kerry O'donnell, Thérèse Ouellet, Weihong Qi, Hadi Quesneville, M Isabel G Roncero, Kye-Yong Seong, Igor V Tetko, Martin Urban, Cees Waalwijk, Todd J Ward, Jiqiang Yao, Bruce W Birren, H Corby Kistler.   

Abstract

We sequenced and annotated the genome of the filamentous fungus Fusarium graminearum, a major pathogen of cultivated cereals. Very few repetitive sequences were detected, and the process of repeat-induced point mutation, in which duplicated sequences are subject to extensive mutation, may partially account for the reduced repeat content and apparent low number of paralogous (ancestrally duplicated) genes. A second strain of F. graminearum contained more than 10,000 single-nucleotide polymorphisms, which were frequently located near telomeres and within other discrete chromosomal segments. Many highly polymorphic regions contained sets of genes implicated in plant-fungus interactions and were unusually divergent, with higher rates of recombination. These regions of genome innovation may result from selection due to interactions of F. graminearum with its plant hosts.

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Year:  2007        PMID: 17823352     DOI: 10.1126/science.1143708

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  297 in total

1.  Genome-wide comparative analysis of pogo-like transposable elements in different Fusarium species.

Authors:  Marie Dufresne; Olivier Lespinet; Marie-Josée Daboussi; Aurélie Hua-Van
Journal:  J Mol Evol       Date:  2011-11-18       Impact factor: 2.395

Review 2.  Advances in linking polyketides and non-ribosomal peptides to their biosynthetic gene clusters in Fusarium.

Authors:  Mikkel Rank Nielsen; Teis Esben Sondergaard; Henriette Giese; Jens Laurids Sørensen
Journal:  Curr Genet       Date:  2019-05-28       Impact factor: 3.886

3.  Effects of Phospholipase C on Fusarium graminearum Growth and Development.

Authors:  Qili Zhu; Benguo Zhou; Zhengliang Gao; Yuancun Liang
Journal:  Curr Microbiol       Date:  2015-08-28       Impact factor: 2.188

4.  The cyclase-associated protein FgCap1 has both protein kinase A-dependent and -independent functions during deoxynivalenol production and plant infection in Fusarium graminearum.

Authors:  Tao Yin; Qiang Zhang; Jianhua Wang; Huiquan Liu; Chenfang Wang; Jin-Rong Xu; Cong Jiang
Journal:  Mol Plant Pathol       Date:  2017-03-23       Impact factor: 5.663

5.  Insights from sequencing fungal and oomycete genomes: what can we learn about plant disease and the evolution of pathogenicity?

Authors:  Darren M Soanes; Thomas A Richards; Nicholas J Talbot
Journal:  Plant Cell       Date:  2007-11-16       Impact factor: 11.277

6.  For blighted waves of grain: Fusarium graminearum in the postgenomics era.

Authors:  Frances Trail
Journal:  Plant Physiol       Date:  2009-01       Impact factor: 8.340

Review 7.  Genome evolution in filamentous plant pathogens: why bigger can be better.

Authors:  Sylvain Raffaele; Sophien Kamoun
Journal:  Nat Rev Microbiol       Date:  2012-05-08       Impact factor: 60.633

8.  Reverse transcriptase and intron number evolution.

Authors:  Kemin Zhou; Alan Kuo; Igor V Grigoriev
Journal:  Stem Cell Investig       Date:  2014-09-28

9.  The fate of gene duplicates in the genomes of fungal pathogens.

Authors:  Pari Skamnioti; Rebecca F Furlong; Sarah J Gurr
Journal:  Commun Integr Biol       Date:  2008

10.  Chromatin-level regulation of biosynthetic gene clusters.

Authors:  Jin Woo Bok; Yi-Ming Chiang; Edyta Szewczyk; Yazmid Reyes-Dominguez; Ashley D Davidson; James F Sanchez; Hsien-Chun Lo; Kenji Watanabe; Joseph Strauss; Berl R Oakley; Clay C C Wang; Nancy P Keller
Journal:  Nat Chem Biol       Date:  2009-07       Impact factor: 15.040

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