Literature DB >> 17762879

Mechanisms underlying mutually exclusive expression of virulence genes by malaria parasites.

Ron Dzikowski1, Felomena Li, Borko Amulic, Andrew Eisberg, Matthias Frank, Suchit Patel, Thomas E Wellems, Kirk W Deitsch.   

Abstract

A fundamental yet poorly understood aspect of gene regulation in eukaryotic organisms is the mechanisms that control allelic exclusion and mutually exclusive gene expression. In the malaria parasite Plasmodium falciparum, this process regulates expression of the var gene family--a large, hypervariable repertoire of genes that are responsible for the ability of the parasite to evade the host immune system and for pathogenesis of the disease. A central problem in understanding this process concerns the mechanisms that limit expression to a single gene at a time. Here, we describe results that provide information on the mechanisms that control silencing and single gene expression and differentiate between several models that have recently been proposed. The results provide the first evidence, to our knowledge, supporting the existence of a postulated var-specific, subnuclear expression site and also reinforce the conclusion that var gene regulation is based on cooperative interactions between the two promoters of each var gene.

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Year:  2007        PMID: 17762879      PMCID: PMC2002552          DOI: 10.1038/sj.embor.7401063

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  22 in total

1.  Frequent ectopic recombination of virulence factor genes in telomeric chromosome clusters of P. falciparum.

Authors:  L H Freitas-Junior; E Bottius; L A Pirrit; K W Deitsch; C Scheidig; F Guinet; U Nehrbass; T E Wellems; A Scherf
Journal:  Nature       Date:  2000-10-26       Impact factor: 49.962

Review 2.  Epigenetic reprogramming of the genome--from the germ line to the embryo and back again.

Authors:  K L Arney; S Erhardt; R A Drewell; M A Surani
Journal:  Int J Dev Biol       Date:  2001       Impact factor: 2.203

3.  A pol I transcriptional body associated with VSG mono-allelic expression in Trypanosoma brucei.

Authors:  M Navarro; K Gull
Journal:  Nature       Date:  2001-12-13       Impact factor: 49.962

4.  A functional role for Tsix transcription in blocking Xist RNA accumulation but not in X-chromosome choice.

Authors:  N Stavropoulos; N Lu; J T Lee
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

5.  A silenced Plasmodium falciparum var promoter can be activated in vivo through spontaneous deletion of a silencing element in the intron.

Authors:  Laïla Gannoun-Zaki; Amy Jost; Jianbing Mu; Kirk W Deitsch; Thomas E Wellems
Journal:  Eukaryot Cell       Date:  2005-02

6.  Subnuclear localization of the active variant surface glycoprotein gene expression site in Trypanosoma brucei.

Authors:  I Chaves; J Zomerdijk; A Dirks-Mulder; R W Dirks; A K Raap; P Borst
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-13       Impact factor: 11.205

7.  Transformation of malaria parasites by the spontaneous uptake and expression of DNA from human erythrocytes.

Authors:  K Deitsch; C Driskill; T Wellems
Journal:  Nucleic Acids Res       Date:  2001-02-01       Impact factor: 16.971

8.  Antigenic variation in malaria: in situ switching, relaxed and mutually exclusive transcription of var genes during intra-erythrocytic development in Plasmodium falciparum.

Authors:  A Scherf; R Hernandez-Rivas; P Buffet; E Bottius; C Benatar; B Pouvelle; J Gysin; M Lanzer
Journal:  EMBO J       Date:  1998-09-15       Impact factor: 11.598

Review 9.  Antigenic variation at the infected red cell surface in malaria.

Authors:  S Kyes; P Horrocks; C Newbold
Journal:  Annu Rev Microbiol       Date:  2001       Impact factor: 15.500

Review 10.  One neuron-one receptor rule in the mouse olfactory system.

Authors:  Shou Serizawa; Kazunari Miyamichi; Hitoshi Sakano
Journal:  Trends Genet       Date:  2004-12       Impact factor: 11.639

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  68 in total

Review 1.  Chromatin-mediated epigenetic regulation in the malaria parasite Plasmodium falciparum.

Authors:  Liwang Cui; Jun Miao
Journal:  Eukaryot Cell       Date:  2010-05-07

2.  Characterization of the unusual bidirectional ves promoters driving VESA1 expression and associated with antigenic variation in Babesia bovis.

Authors:  Xinyi Wang; Yu-Ping Xiao; Anne Bouchut; Basima Al-Khedery; Hongbin Wang; David R Allred
Journal:  Eukaryot Cell       Date:  2012-01-27

3.  Antigenic variation in Plasmodium falciparum: moving beyond the laboratory strains.

Authors:  Matthias Frank; Corinna Enderes
Journal:  Wien Klin Wochenschr       Date:  2010-03       Impact factor: 1.704

4.  Chromatin associated sense and antisense noncoding RNAs are transcribed from the var gene family of virulence genes of the malaria parasite Plasmodium falciparum.

Authors:  Christian Epp; Felomena Li; Cali A Howitt; Thanat Chookajorn; Kirk W Deitsch
Journal:  RNA       Date:  2008-11-26       Impact factor: 4.942

Review 5.  Regulation of gene expression in protozoa parasites.

Authors:  Consuelo Gomez; M Esther Ramirez; Mercedes Calixto-Galvez; Olivia Medel; Mario A Rodríguez
Journal:  J Biomed Biotechnol       Date:  2010-03-02

6.  Nuclear repositioning precedes promoter accessibility and is linked to the switching frequency of a Plasmodium falciparum invasion gene.

Authors:  Bradley I Coleman; Ulf Ribacke; Micah Manary; Amy K Bei; Elizabeth A Winzeler; Dyann F Wirth; Manoj T Duraisingh
Journal:  Cell Host Microbe       Date:  2012-12-13       Impact factor: 21.023

7.  Nucleosome landscape and control of transcription in the human malaria parasite.

Authors:  Nadia Ponts; Elena Y Harris; Jacques Prudhomme; Ivan Wick; Colleen Eckhardt-Ludka; Glenn R Hicks; Gary Hardiman; Stefano Lonardi; Karine G Le Roch
Journal:  Genome Res       Date:  2010-01-06       Impact factor: 9.043

8.  Putative DNA G-quadruplex formation within the promoters of Plasmodium falciparum var genes.

Authors:  Nicolas Smargiasso; Valérie Gabelica; Christian Damblon; Frédéric Rosu; Edwin De Pauw; Marie-Paule Teulade-Fichou; J Alexandra Rowe; Antoine Claessens
Journal:  BMC Genomics       Date:  2009-08-06       Impact factor: 3.969

9.  Simultaneous transcription of duplicated var2csa gene copies in individual Plasmodium falciparum parasites.

Authors:  Kim J M Brolin; Ulf Ribacke; Sandra Nilsson; Johan Ankarklev; Kirsten Moll; Mats Wahlgren; Qijun Chen
Journal:  Genome Biol       Date:  2009-10-22       Impact factor: 13.583

10.  Genome-wide nucleosome mapping of Plasmodium falciparum reveals histone-rich coding and histone-poor intergenic regions and chromatin remodeling of core and subtelomeric genes.

Authors:  Scott J Westenberger; Long Cui; Neekesh Dharia; Elizabeth Winzeler; Liwang Cui
Journal:  BMC Genomics       Date:  2009-12-16       Impact factor: 3.969

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