Literature DB >> 17720920

Mitochondrial DNA phylogeny of cultivated and wild beets: relationships among cytoplasmic male-sterility-inducing and nonsterilizing cytoplasms.

Satsuki Nishizawa1, Tetsuo Mikami, Tomohiko Kubo.   

Abstract

Cytoplasmic male sterility (CMS), the maternally inherited failure to produce functional pollen, has been used in the breeding of sugar beet (Beta vulgaris ssp. vulgaris). At least three different sources of CMS can be distinguished from one another as well as from normal fertile cytoplasm by polymorphisms in their mitochondrial genomes. Here we analyzed 50 accessions of cultivated and wild beets to investigate the phylogenetic relationships among male-sterility-inducing and normal cytoplasms. The haplotypes were characterized by the nucleotide sequence of the mitochondrial cox2-cox1 spacer region and mitochondrial minisatellite loci. The results indicated that (1) a normal cytoplasm line, cv. TK81-O, was situated at the major core node of the haplotype network, and (2) the three sterilizing cytoplasms in question derived independently from the core haplotype. The evolutionary pathway was investigated by physical mapping study of the mitochondrial genome of a wild beet (B. vulgaris ssp. orientalis) accession BGRC56777 which shared the same mitochondrial haplotype with TK81-O, but was not identical to TK81-O for the RFLP profiles of mitochondrial DNA. Interestingly, three sets of inverted repeated sequences appeared to have been involved in a series of recombination events during the course of evolution between the BGRC56777 and the TK81-O mitochondrial genomes.

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Year:  2007        PMID: 17720920      PMCID: PMC2147957          DOI: 10.1534/genetics.107.076380

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  18 in total

1.  Alterations in organization and transcription of the mitochondrial genome of cytoplasmic male sterile sugar beet (Beta vulgaris L.).

Authors:  T Kubo; S Nishizawa; T Mikami
Journal:  Mol Gen Genet       Date:  1999-09

2.  Small, repetitive DNAs contribute significantly to the expanded mitochondrial genome of cucumber.

Authors:  J W Lilly; M J Havey
Journal:  Genetics       Date:  2001-09       Impact factor: 4.562

3.  The cytoplasmic male-sterile type and normal type mitochondrial genomes of sugar beet share the same complement of genes of known function but differ in the content of expressed ORFs.

Authors:  M Satoh; T Kubo; S Nishizawa; A Estiati; N Itchoda; T Mikami
Journal:  Mol Genet Genomics       Date:  2004-09-01       Impact factor: 3.291

4.  The Owen mitochondrial genome in sugar beet (Beta vulgaris L.): possible mechanisms of extensive rearrangements and the origin of the mitotype-unique regions.

Authors:  Mizuho Satoh; Tomohiko Kubo; Tetsuo Mikami
Journal:  Theor Appl Genet       Date:  2006-05-31       Impact factor: 5.699

5.  Mitochondrial gene variation and phylogenetic relationships in the genus Beta.

Authors:  M Senda; Y Onodera; T Kinoshita; T Mikami
Journal:  Theor Appl Genet       Date:  1995-06       Impact factor: 5.699

6.  The complete nucleotide sequence of the mitochondrial genome of sugar beet (Beta vulgaris L.) reveals a novel gene for tRNA(Cys)(GCA).

Authors:  T Kubo; S Nishizawa; A Sugawara; N Itchoda; A Estiati; T Mikami
Journal:  Nucleic Acids Res       Date:  2000-07-01       Impact factor: 16.971

7.  Emergence of gynodioecy in wild beet (Beta vulgaris ssp. maritima L.): a genealogical approach using chloroplastic nucleotide sequences.

Authors:  Stéphane Fénart; Pascal Touzet; Jean-François Arnaud; Joël Cuguen
Journal:  Proc Biol Sci       Date:  2006-06-07       Impact factor: 5.349

8.  Physical and gene organization of mitochondrial DNA from the fertile cytoplasm of sugarbeet (Beta vulgaris L.).

Authors:  T Kubo; Y Satoh; T Muro; T Kinoshita; T Mikami
Journal:  Curr Genet       Date:  1995-08       Impact factor: 3.886

9.  Variable number of tandem repeat loci in the mitochondrial genomes of beets.

Authors:  S Nishizawa; T Kubo; T Mikami
Journal:  Curr Genet       Date:  2000-01       Impact factor: 3.886

10.  Spatial analysis of nuclear and cytoplasmic DNA diversity in wild sea beet (Beta vulgaris ssp. maritima) populations: do marine currents shape the genetic structure?

Authors:  Virgil Fievet; Pascal Touzet; Jean-François Arnaud; Joël Cuguen
Journal:  Mol Ecol       Date:  2007-05       Impact factor: 6.185

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  4 in total

1.  Polymorphic minisatellites in the mitochondrial DNAs of Oryza and Brassica.

Authors:  Yujiro Honma; Yu Yoshida; Toru Terachi; Kinya Toriyama; Tetsuo Mikami; Tomohiko Kubo
Journal:  Curr Genet       Date:  2011-05-12       Impact factor: 3.886

2.  Identification of molecular variants of the nonrestoring restorer-of-fertility 1 allele in sugar beet (Beta vulgaris L.).

Authors:  Takashi Ohgami; Daisuke Uchiyama; Sachiyo Ue; Rika Yui-Kurino; Yu Yoshida; Yoko Kamei; Yosuke Kuroda; Kazunori Taguchi; Tomohiko Kubo
Journal:  Theor Appl Genet       Date:  2015-12-29       Impact factor: 5.699

3.  Structural and content diversity of mitochondrial genome in beet: a comparative genomic analysis.

Authors:  A Darracq; J S Varré; L Maréchal-Drouard; A Courseaux; V Castric; P Saumitou-Laprade; S Oztas; P Lenoble; B Vacherie; V Barbe; P Touzet
Journal:  Genome Biol Evol       Date:  2011-05-21       Impact factor: 3.416

4.  Chloroplastic and nuclear diversity of wild beets at a large geographical scale: Insights into the evolutionary history of the Beta section.

Authors:  Pascal Touzet; Sarah Villain; Laetitia Buret; Hélène Martin; Anne-Catherine Holl; Céline Poux; Joël Cuguen
Journal:  Ecol Evol       Date:  2018-02-14       Impact factor: 2.912

  4 in total

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