Literature DB >> 17704573

Using barium ions for heavy-atom derivatization and phasing of xylanase II from Trichoderma longibrachiatum.

Natalia Moiseeva1, Marc Allaire.   

Abstract

This paper describes the use of barium chloride to produce a heavy-atom derivative of xylanase II crystals from Trichoderma longibrachiatum, which was obtained either by cocrystallization or soaking. SAD phasing led to interpretable electron-density maps that allowed unambiguous chain tracing. In the best case, with a data set collected at 9.5 keV, 88% of the residues were built, with 83% of the side chains assigned. The barium ions are found to mainly interact with main-chain carbonyl groups and water molecules. It is suggested that barium ions could also be used as a potential anomalous scatterer in the quick cryosoaking procedure for phasing.

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Year:  2007        PMID: 17704573     DOI: 10.1107/S090744490703418X

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  3 in total

1.  Use of europium ions for SAD phasing of lysozyme at the Cu Kα wavelength.

Authors:  Balakrishnan Vijayakumar; Devadasan Velmurugan
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-12-25

2.  In-house SAD phasing with surface-bound cerium ions.

Authors:  K Natesan Vennila; Devadasan Velmurugan
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-11-25

3.  Utility of anion and cation combinations for phasing of protein structures.

Authors:  Ashwani Sharma; Manickam Yogavel; Amit Sharma
Journal:  J Struct Funct Genomics       Date:  2012-05-06
  3 in total

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