Literature DB >> 17701177

Modelling and simulations of multi-component lipid membranes and open membranes via diffuse interface approaches.

Xiaoqiang Wang1, Qiang Du.   

Abstract

Diffuse interface (phase field) models are developed for multi-component vesicle membranes with different lipid compositions and membranes with free boundary. These models are used to simulate the deformation of membranes under the elastic bending energy and the line tension energy with prescribed volume and surface area constraints. By comparing our numerical simulations with recent biological experiments, it is demonstrated that the diffuse interface models can effectively capture the rich phenomena associated with the multi-component vesicle transformation and thus offering great functionality in their simulation and modelling.

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Year:  2007        PMID: 17701177     DOI: 10.1007/s00285-007-0118-2

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.259


  18 in total

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Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  2000-01

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Authors:  Tobias Baumgart; Samuel T Hess; Watt W Webb
Journal:  Nature       Date:  2003-10-23       Impact factor: 49.962

Review 3.  Model systems, lipid rafts, and cell membranes.

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Journal:  Annu Rev Biophys Biomol Struct       Date:  2004

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Authors:  J Liam McWhirter; Gary Ayton; Gregory A Voth
Journal:  Biophys J       Date:  2004-09-03       Impact factor: 4.033

5.  Curvature-induced lateral phase segregation in two-component vesicles.

Authors: 
Journal:  Phys Rev Lett       Date:  1993-03-01       Impact factor: 9.161

6.  Theoretical analysis of opening-up vesicles with single and two holes.

Authors:  Tamiki Umeda; Yukio Suezaki; Kingo Takiguchi; Hirokazu Hotani
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2005-01-31

7.  Membrane elasticity in giant vesicles with fluid phase coexistence.

Authors:  T Baumgart; S Das; W W Webb; J T Jenkins
Journal:  Biophys J       Date:  2005-05-13       Impact factor: 4.033

8.  Shape transformations of vesicles with intramembrane domains.

Authors: 
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  1996-03

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Authors:  A Saitoh; K Takiguchi; Y Tanaka; H Hotani
Journal:  Proc Natl Acad Sci U S A       Date:  1998-02-03       Impact factor: 11.205

10.  Domains and rafts in membranes - hidden dimensions of selforganization.

Authors:  Reinhard Lipowsky
Journal:  J Biol Phys       Date:  2002-06       Impact factor: 1.365

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  17 in total

1.  Topological determination of early morphogenesis in Metazoa.

Authors:  Eugene Presnov; Valeria Isaeva; Nikolay Kasyanov
Journal:  Theory Biosci       Date:  2010-07-30       Impact factor: 1.919

2.  Geometric and potential driving formation and evolution of biomolecular surfaces.

Authors:  P W Bates; Zhan Chen; Yuhui Sun; Guo-Wei Wei; Shan Zhao
Journal:  J Math Biol       Date:  2008-10-22       Impact factor: 2.259

3.  Signaling networks and cell motility: a computational approach using a phase field description.

Authors:  Wieland Marth; Axel Voigt
Journal:  J Math Biol       Date:  2013-07-09       Impact factor: 2.259

4.  Existence, bifurcation, and geometric evolution of quasi-bilayers in the multicomponent functionalized Cahn-Hilliard equation.

Authors:  Keith Promislow; Qiliang Wu
Journal:  J Math Biol       Date:  2016-12-31       Impact factor: 2.259

5.  Fast Simulation of Lipid Vesicle Deformation Using Spherical Harmonic Approximation.

Authors:  Michael Mikucki; Yongcheng Zhou
Journal:  Commun Comput Phys       Date:  2016-12-05       Impact factor: 3.246

6.  Geodesic curvature driven surface microdomain formation.

Authors:  Melissa R Adkins; Y C Zhou
Journal:  J Comput Phys       Date:  2017-05-18       Impact factor: 3.553

7.  A two phase field model for tracking vesicle-vesicle adhesion.

Authors:  Rui Gu; Xiaoqiang Wang; Max Gunzburger
Journal:  J Math Biol       Date:  2016-03-24       Impact factor: 2.259

8.  Two-phase vesicles: a study on evolutionary and stationary models.

Authors:  MohammadMahdi Sahebifard; Alireza Shahidi; Saeed Ziaei-Rad
Journal:  Eur Biophys J       Date:  2016-09-23       Impact factor: 1.733

9.  Elastic and dynamic properties of membrane phase-field models.

Authors:  Guillermo R Lázaro; Ignacio Pagonabarraga; Aurora Hernández-Machado
Journal:  Eur Phys J E Soft Matter       Date:  2017-09-19       Impact factor: 1.890

10.  Phase-field modeling of the dynamics of multicomponent vesicles: Spinodal decomposition, coarsening, budding, and fission.

Authors:  John S Lowengrub; Andreas Rätz; Axel Voigt
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-03-31
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