Literature DB >> 17700858

Moving marks: dynamic histone modifications in yeast.

Jocelyn E Krebs1.   

Abstract

Posttranslational modifications of histones, both in the tails and in the globular cores, alter the functional landscape of chromatin by modulating DNA accessibility and chromatin stability, and by providing an enormous variety of alternative interaction surfaces for trans-acting factors. Complex patterns of acetylation, methylation, phosphorylation, ubiquitylation (and others) result in spatial domains of meaningful chromatin modifications, often referred to as the histone code. Whole genome studies have uncovered striking genome-wide patterns of specific modifications, and individual modifications have been linked to a variety of functional consequences for transcription, replication and repair. A key aspect of the role of histone modifications, however, is their dynamic nature-the precise timing of the addition and removal of specific marks is an essential part of the histone code. This review will highlight examples from budding yeast that illustrate the importance of these dynamic modifications in controlling transcription and repair.

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Year:  2007        PMID: 17700858     DOI: 10.1039/b703923a

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN: 1742-2051


  27 in total

1.  Novel trans-tail regulation of H2B ubiquitylation and H3K4 methylation by the N terminus of histone H2A.

Authors:  Suting Zheng; John J Wyrick; Joseph C Reese
Journal:  Mol Cell Biol       Date:  2010-05-24       Impact factor: 4.272

Review 2.  Environmental epigenetics and asthma: current concepts and call for studies.

Authors:  Rachel L Miller; Shuk-Mei Ho
Journal:  Am J Respir Crit Care Med       Date:  2008-01-10       Impact factor: 21.405

3.  Determinants of histone H4 N-terminal domain function during nucleosomal array oligomerization: roles of amino acid sequence, domain length, and charge density.

Authors:  Steven J McBryant; Joshua Klonoski; Troy C Sorensen; Sarah S Norskog; Sere Williams; Michael G Resch; James A Toombs; Sarah E Hobdey; Jeffrey C Hansen
Journal:  J Biol Chem       Date:  2009-04-24       Impact factor: 5.157

4.  Genetic evidence for the importance of protein acetylation and protein deacetylation in the halophilic archaeon Haloferax volcanii.

Authors:  Neta Altman-Price; Moshe Mevarech
Journal:  J Bacteriol       Date:  2008-12-29       Impact factor: 3.490

5.  Histone chaperones link histone nuclear import and chromatin assembly.

Authors:  Kristin M Keck; Lucy F Pemberton
Journal:  Biochim Biophys Acta       Date:  2011-10-08

6.  General method for rapid purification of native chromatin fragments.

Authors:  Vyacheslav I Kuznetsov; Spencer A Haws; Catherine A Fox; John M Denu
Journal:  J Biol Chem       Date:  2018-05-24       Impact factor: 5.157

Review 7.  Epigenome manipulation as a pathway to new natural product scaffolds and their congeners.

Authors:  Robert H Cichewicz
Journal:  Nat Prod Rep       Date:  2009-10-27       Impact factor: 13.423

8.  Phosphorylation of histone H2A.X by DNA-dependent protein kinase is not affected by core histone acetylation, but it alters nucleosome stability and histone H1 binding.

Authors:  Andra Li; Yaping Yu; Sheng-Chun Lee; Toyotaka Ishibashi; Susan P Lees-Miller; Juan Ausió
Journal:  J Biol Chem       Date:  2010-03-31       Impact factor: 5.157

Review 9.  Quantification of histone modifications using ¹⁵N metabolic labeling.

Authors:  Chunchao Zhang; Yifan Liu; Philip C Andrews
Journal:  Methods       Date:  2013-02-27       Impact factor: 3.608

10.  A glycolytic burst drives glucose induction of global histone acetylation by picNuA4 and SAGA.

Authors:  R Magnus N Friis; Bob P Wu; Stacey N Reinke; Darren J Hockman; Brian D Sykes; Michael C Schultz
Journal:  Nucleic Acids Res       Date:  2009-04-30       Impact factor: 16.971

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