Literature DB >> 20498280

Novel trans-tail regulation of H2B ubiquitylation and H3K4 methylation by the N terminus of histone H2A.

Suting Zheng1, John J Wyrick, Joseph C Reese.   

Abstract

Chromatin is regulated by cross talk among different histone modifications, which can occur between residues within the same tail or different tails in the nucleosome. The latter is referred to as trans-tail regulation, and the best-characterized example of this is the dependence of H3 methylation on H2B ubiquitylation. Here we describe a novel form of trans-tail regulation of histone modifications involving the N-terminal tail of histone H2A. Mutating or deleting residues in the N-terminal tail of H2A reduces H2B ubiquitylation and H3K4 methylation but does not affect the recruitment of the modifying enzymes, Rad6/Bre1 and COMPASS, to genes. The H2A tail is required for the incorporation of Cps35 into COMPASS, and increasing the level of ubiquitylated H2B in H2A tail mutants suppresses the H3K4 methylation defect, suggesting that the H2A tail regulates H2B-H3 cross talk. We mapped the region primarily responsible for this regulation to the H2A repression domain, HAR. The HAR and K123 of H2B are in close proximity to each other on the nucleosome, suggesting that they form a docking site for the ubiquitylation machinery. Interestingly, the HAR is partially occluded by nucleosomal DNA, suggesting that the function of the H2A cross talk pathway is to restrict histone modifications to nucleosomes altered by transcription.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20498280      PMCID: PMC2897545          DOI: 10.1128/MCB.00324-10

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  71 in total

1.  Methylation of histone H3 Lys 4 in coding regions of active genes.

Authors:  Bradley E Bernstein; Emily L Humphrey; Rachel L Erlich; Robert Schneider; Peter Bouman; Jun S Liu; Tony Kouzarides; Stuart L Schreiber
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

Review 2.  Histone methylation and ubiquitination with their cross-talk and roles in gene expression and stability.

Authors:  A Shukla; P Chaurasia; S R Bhaumik
Journal:  Cell Mol Life Sci       Date:  2009-04       Impact factor: 9.261

Review 3.  Crosstalk among Histone Modifications.

Authors:  Tamaki Suganuma; Jerry L Workman
Journal:  Cell       Date:  2008-11-14       Impact factor: 41.582

4.  COMPASS: a complex of proteins associated with a trithorax-related SET domain protein.

Authors:  T Miller; N J Krogan; J Dover; H Erdjument-Bromage; P Tempst; M Johnston; J F Greenblatt; A Shilatifard
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-30       Impact factor: 11.205

5.  The Saccharomyces cerevisiae Set1 complex includes an Ash2 homologue and methylates histone 3 lysine 4.

Authors:  A Roguev; D Schaft; A Shevchenko; W W Pijnappel; M Wilm; R Aasland; A F Stewart
Journal:  EMBO J       Date:  2001-12-17       Impact factor: 11.598

Review 6.  The role of histone H2A and H2B post-translational modifications in transcription: a genomic perspective.

Authors:  John J Wyrick; Michael A Parra
Journal:  Biochim Biophys Acta       Date:  2008-07-14

7.  Histone H2BK123 monoubiquitination is the critical determinant for H3K4 and H3K79 trimethylation by COMPASS and Dot1.

Authors:  Shima Nakanishi; Jung Shin Lee; Kathryn E Gardner; Jennifer M Gardner; Yoh-hei Takahashi; Mahesh B Chandrasekharan; Zu-Wen Sun; Mary Ann Osley; Brian D Strahl; Sue L Jaspersen; Ali Shilatifard
Journal:  J Cell Biol       Date:  2009-08-10       Impact factor: 10.539

8.  Direct Bre1-Paf1 complex interactions and RING finger-independent Bre1-Rad6 interactions mediate histone H2B ubiquitylation in yeast.

Authors:  Jaehoon Kim; Robert G Roeder
Journal:  J Biol Chem       Date:  2009-06-15       Impact factor: 5.157

9.  Regulation of H3K4 trimethylation via Cps40 (Spp1) of COMPASS is monoubiquitination independent: implication for a Phe/Tyr switch by the catalytic domain of Set1.

Authors:  Yoh Hei Takahashi; Jung Shin Lee; Selene K Swanson; Anita Saraf; Laurence Florens; Michael P Washburn; Raymond C Trievel; Ali Shilatifard
Journal:  Mol Cell Biol       Date:  2009-04-27       Impact factor: 4.272

10.  Dimethylation of H3K4 by Set1 recruits the Set3 histone deacetylase complex to 5' transcribed regions.

Authors:  TaeSoo Kim; Stephen Buratowski
Journal:  Cell       Date:  2009-04-17       Impact factor: 41.582

View more
  33 in total

Review 1.  The COMPASS family of histone H3K4 methylases: mechanisms of regulation in development and disease pathogenesis.

Authors:  Ali Shilatifard
Journal:  Annu Rev Biochem       Date:  2012       Impact factor: 23.643

Review 2.  Ubiquitin and proteasomes in transcription.

Authors:  Fuqiang Geng; Sabine Wenzel; William P Tansey
Journal:  Annu Rev Biochem       Date:  2012-03-08       Impact factor: 23.643

3.  Dynamic loss of H2B ubiquitylation without corresponding changes in H3K4 trimethylation during myogenic differentiation.

Authors:  Vasupradha Vethantham; Yan Yang; Christopher Bowman; Patrik Asp; Jeong-Heon Lee; David G Skalnik; Brian D Dynlacht
Journal:  Mol Cell Biol       Date:  2012-01-17       Impact factor: 4.272

4.  The Paf1 complex subunit Rtf1 buffers cells against the toxic effects of [PSI+] and defects in Rkr1-dependent protein quality control in Saccharomyces cerevisiae.

Authors:  Kristin M Klucevsek; Mary A Braun; Karen M Arndt
Journal:  Genetics       Date:  2012-05-17       Impact factor: 4.562

Review 5.  SET for life: biochemical activities and biological functions of SET domain-containing proteins.

Authors:  Hans-Martin Herz; Alexander Garruss; Ali Shilatifard
Journal:  Trends Biochem Sci       Date:  2013-10-20       Impact factor: 13.807

6.  A highly conserved region within H2B is important for FACT to act on nucleosomes.

Authors:  Suting Zheng; J Brooks Crickard; Abhinaya Srikanth; Joseph C Reese
Journal:  Mol Cell Biol       Date:  2013-11-18       Impact factor: 4.272

7.  Intermolecular interactions within the abundant DEAD-box protein Dhh1 regulate its activity in vivo.

Authors:  Arnob Dutta; Suting Zheng; Deepti Jain; Craig E Cameron; Joseph C Reese
Journal:  J Biol Chem       Date:  2011-06-03       Impact factor: 5.157

8.  Identification of histone mutants that are defective for transcription-coupled nucleosome occupancy.

Authors:  Sarah J Hainer; Joseph A Martens
Journal:  Mol Cell Biol       Date:  2011-07-05       Impact factor: 4.272

9.  The Paf1 complex represses SER3 transcription in Saccharomyces cerevisiae by facilitating intergenic transcription-dependent nucleosome occupancy of the SER3 promoter.

Authors:  Justin A Pruneski; Sarah J Hainer; Kostadin O Petrov; Joseph A Martens
Journal:  Eukaryot Cell       Date:  2011-08-26

10.  Histone Sprocket Arginine Residues Are Important for Gene Expression, DNA Repair, and Cell Viability in Saccharomyces cerevisiae.

Authors:  Amelia J Hodges; Isaura J Gallegos; Marian F Laughery; Rithy Meas; Linh Tran; John J Wyrick
Journal:  Genetics       Date:  2015-05-12       Impact factor: 4.562

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.