Literature DB >> 17677882

Stochastic resonant signaling in enzyme cascades.

Yueheng Lan1, Garegin A Papoian.   

Abstract

We observe the phenomenon of stochastic resonant signaling in signal amplification enzyme cascades, where certain optimal reaction rates minimize the average threshold-crossing time. We develop a new analytical technique to obtain the mean first passage time, based on a novel decomposition of the master equation. Our analytical results are in good agreement with the exact numerical simulations. We demonstrate that resonant behavior may be a ubiquitous phenomenon in stochastic threshold crossing in cell signaling. The physical principles behind this phenomenon are elucidated.

Mesh:

Substances:

Year:  2007        PMID: 17677882     DOI: 10.1103/PhysRevLett.98.228301

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  14 in total

1.  Protein fluxes along the filopodium as a framework for understanding the growth-retraction dynamics: the interplay between diffusion and active transport.

Authors:  Pavel I Zhuravlev; Garegin A Papoian
Journal:  Cell Adh Migr       Date:  2011 Sep-Oct       Impact factor: 3.405

2.  Design of active transport must be highly intricate: a possible role of myosin and Ena/VASP for G-actin transport in filopodia.

Authors:  Pavel I Zhuravlev; Bryan S Der; Garegin A Papoian
Journal:  Biophys J       Date:  2010-04-21       Impact factor: 4.033

3.  Mechano-chemical feedbacks regulate actin mesh growth in lamellipodial protrusions.

Authors:  Longhua Hu; Garegin A Papoian
Journal:  Biophys J       Date:  2010-04-21       Impact factor: 4.033

4.  The stochastic dynamics of filopodial growth.

Authors:  Yueheng Lan; Garegin A Papoian
Journal:  Biophys J       Date:  2008-01-30       Impact factor: 4.033

5.  Elimination of fast variables in chemical Langevin equations.

Authors:  Yueheng Lan; Timothy C Elston; Garegin A Papoian
Journal:  J Chem Phys       Date:  2008-12-07       Impact factor: 3.488

6.  A stochastic spectral analysis of transcriptional regulatory cascades.

Authors:  Aleksandra M Walczak; Andrew Mugler; Chris H Wiggins
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-07       Impact factor: 11.205

7.  Three-state kinetic mechanism for scaffold-mediated signal transduction.

Authors:  Jason W Locasale
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-11-21

8.  Molecular noise of capping protein binding induces macroscopic instability in filopodial dynamics.

Authors:  Pavel I Zhuravlev; Garegin A Papoian
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-25       Impact factor: 11.205

9.  An effective method for computing the noise in biochemical networks.

Authors:  Jiajun Zhang; Qing Nie; Miao He; Tianshou Zhou
Journal:  J Chem Phys       Date:  2013-02-28       Impact factor: 3.488

10.  Spectral solutions to stochastic models of gene expression with bursts and regulation.

Authors:  Andrew Mugler; Aleksandra M Walczak; Chris H Wiggins
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-10-20
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.