Literature DB >> 17677092

Kinetics of viral self-assembly: role of the single-stranded RNA antenna.

Tao Hu1, B I Shklovskii.   

Abstract

Many viruses self-assemble from a large number of identical capsid proteins with long flexible N-terminal tails and single-stranded (ss) RNA. We study the role of the strong Coulomb interaction of positive N-terminal tails with ssRNA in the kinetics of in vitro virus self-assembly. Capsid proteins stick to the unassembled chain of ssRNA (which we call an "antenna") and slide on it toward the assembly site. We show that at excess of capsid proteins such one-dimensional diffusion accelerates self-assembly more than ten times. On the other hand at excess of ssRNA, the antenna slows self-assembly down. Several experiments are proposed to verify the role of the ssRNA antenna.

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Year:  2007        PMID: 17677092     DOI: 10.1103/PhysRevE.75.051901

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  20 in total

1.  Mechanisms of capsid assembly around a polymer.

Authors:  Aleksandr Kivenson; Michael F Hagan
Journal:  Biophys J       Date:  2010-07-21       Impact factor: 4.033

2.  Modeling Viral Capsid Assembly.

Authors:  Michael F Hagan
Journal:  Adv Chem Phys       Date:  2014       Impact factor: 1.000

3.  Controlling viral capsid assembly with templating.

Authors:  Michael F Hagan
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-05-08

4.  A theory for viral capsid assembly around electrostatic cores.

Authors:  Michael F Hagan
Journal:  J Chem Phys       Date:  2009-03-21       Impact factor: 3.488

5.  To build a virus on a nucleic acid substrate.

Authors:  Adam Zlotnick; J Zachary Porterfield; Joseph Che-Yen Wang
Journal:  Biophys J       Date:  2013-04-02       Impact factor: 4.033

6.  Watching a virus grow.

Authors:  Bogdan Dragnea
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-17       Impact factor: 11.205

Review 7.  Mechanisms of virus assembly.

Authors:  Jason D Perlmutter; Michael F Hagan
Journal:  Annu Rev Phys Chem       Date:  2014-12-17       Impact factor: 12.703

8.  Scaffold properties are a key determinant of the size and shape of self-assembled virus-derived particles.

Authors:  Stanislav Kler; Joseph Che-Yen Wang; Mary Dhason; Ariella Oppenheim; Adam Zlotnick
Journal:  ACS Chem Biol       Date:  2013-10-23       Impact factor: 5.100

9.  Packaging of a polymer by a viral capsid: the interplay between polymer length and capsid size.

Authors:  Yufang Hu; Roya Zandi; Adriana Anavitarte; Charles M Knobler; William M Gelbart
Journal:  Biophys J       Date:  2007-11-02       Impact factor: 4.033

10.  Pathways for virus assembly around nucleic acids.

Authors:  Jason D Perlmutter; Matthew R Perkett; Michael F Hagan
Journal:  J Mol Biol       Date:  2014-07-16       Impact factor: 5.469

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