Literature DB >> 17670925

Polymorphisms in gyrA and gyrB genes among Mycobacterium avium subsp. paratuberculosis type I, II, and III isolates.

E Castellanos1, A Aranaz, B Romero, L de Juan, J Alvarez, J Bezos, S Rodríguez, K Stevenson, A Mateos, L Domínguez.   

Abstract

The analysis of the gyrA and gyrB genes of a panel of Mycobacterium avium subsp. paratuberculosis isolates from types I, II, and III detected type-specific single nucleotide polymorphisms. Based on these results, we developed a PCR and restriction enzyme analysis to discriminate type I and III isolates. The application of this technique would be the unique strategy to characterize these strains when there is not enough bacterial growth to perform pulsed-field gel electrophoresis and IS900 restriction fragment length polymorphism.

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Year:  2007        PMID： 17670925      PMCID： PMC2045374          DOI： 10.1128/JCM.01411-07

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  30 in total

1.  Mycobacterium avium subsp. paratuberculosis strains from cattle and sheep can be distinguished by a PCR test based on a novel DNA sequence difference.

Authors:  Desmond M Collins; May De Zoete; Sonia M Cavaignac
Journal:  J Clin Microbiol       Date:  2002-12       Impact factor: 5.948

Review 2.  Multi-locus sequence typing: a tool for global epidemiology.

Authors:  Rachel Urwin; Martin C J Maiden
Journal:  Trends Microbiol       Date:  2003-10       Impact factor: 17.079

3.  Differentiation of phylogenetically related slowly growing mycobacteria by their gyrB sequences.

Authors:  H Kasai; T Ezaki; S Harayama
Journal:  J Clin Microbiol       Date:  2000-01       Impact factor: 5.948

4.  Molecular characterization of pigmented and nonpigmented isolates of Mycobacterium avium subsp. paratuberculosis.

Authors:  Karen Stevenson; Valerie M Hughes; Lucía de Juan; Neil F Inglis; Frank Wright; J Michael Sharp
Journal:  J Clin Microbiol       Date:  2002-05       Impact factor: 5.948

5.  A new evolutionary scenario for the Mycobacterium tuberculosis complex.

Authors:  R Brosch; S V Gordon; M Marmiesse; P Brodin; C Buchrieser; K Eiglmeier; T Garnier; C Gutierrez; G Hewinson; K Kremer; L M Parsons; A S Pym; S Samper; D van Soolingen; S T Cole
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-12       Impact factor: 11.205

6.  Detection and verification of Mycobacterium avium subsp. paratuberculosis in fresh ileocolonic mucosal biopsy specimens from individuals with and without Crohn's disease.

Authors:  Tim J Bull; Elizabeth J McMinn; Karim Sidi-Boumedine; Angela Skull; Damien Durkin; Penny Neild; Glenn Rhodes; Roger Pickup; John Hermon-Taylor
Journal:  J Clin Microbiol       Date:  2003-07       Impact factor: 5.948

7.  Elevation of Mycobacterium tuberculosis subsp. caprae Aranaz et al. 1999 to species rank as Mycobacterium caprae comb. nov., sp. nov.

Authors:  Alicia Aranaz; Debby Cousins; Ana Mateos; Lucas Domínguez
Journal:  Int J Syst Evol Microbiol       Date:  2003-11       Impact factor: 2.747

8.  Modeling bacterial evolution with comparative-genome-based marker systems: application to Mycobacterium tuberculosis evolution and pathogenesis.

Authors:  David Alland; Thomas S Whittam; Megan B Murray; M Donald Cave; Manzour H Hazbon; Kim Dix; Mark Kokoris; Andreas Duesterhoeft; Jonathan A Eisen; Claire M Fraser; Robert D Fleischmann
Journal:  J Bacteriol       Date:  2003-06       Impact factor: 3.490

9.  Characterization of genetic differences between Mycobacterium avium subsp. paratuberculosis type I and type II isolates.

Authors:  Karen Dohmann; Birgit Strommenger; Karen Stevenson; Lucía de Juan; Janin Stratmann; Vivek Kapur; Tim J Bull; Gerald-Friedrich Gerlach
Journal:  J Clin Microbiol       Date:  2003-11       Impact factor: 5.948

10.  Comparing single-nucleotide polymorphism marker-based and microsatellite marker-based linkage analyses.

Authors:  Ayse Ulgen; Wentian Li
Journal:  BMC Genet       Date:  2005-12-30       Impact factor: 2.797
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  15 in total

1.  Multiplexed typing of Mycobacterium avium subsp. paratuberculosis types I, II, and III by Luminex xMAP suspension array.

Authors:  Michele Gastaldelli; Elisabetta Stefani; Antonia Anna Lettini; Nicola Pozzato
Journal:  J Clin Microbiol       Date:  2010-11-17       Impact factor: 5.948

2.  Discovery of stable and variable differences in the Mycobacterium avium subsp. paratuberculosis type I, II, and III genomes by pan-genome microarray analysis.

Authors:  Elena Castellanos; Alicia Aranaz; Katherine A Gould; Richard Linedale; Karen Stevenson; Julio Alvarez; Lucas Dominguez; Lucia de Juan; Jason Hinds; Tim J Bull
Journal:  Appl Environ Microbiol       Date:  2008-12-01       Impact factor: 4.792

3.  Rapid identification and differentiation of Mycobacterium avium subspecies paratuberculosis types by use of real-time PCR and high-resolution melt analysis of the MAP1506 locus.

Authors:  Elena Castellanos; Alicia Aranaz; Jeroen De Buck
Journal:  J Clin Microbiol       Date:  2010-02-03       Impact factor: 5.948

4.  Sequence polymorphisms in a surface PPE protein distinguish types I, II, and III of Mycobacterium avium subsp. paratuberculosis.

Authors:  Tanya A Griffiths; Kevin Rioux; Jeroen De Buck
Journal:  J Clin Microbiol       Date:  2008-02-13       Impact factor: 5.948

5.  Single nucleotide polymorphisms in the IS900 sequence of Mycobacterium avium subsp. paratuberculosis are strain type specific.

Authors:  Elena Castellanos; Alicia Aranaz; Lucia de Juan; Julio Alvarez; Sabrina Rodríguez; Beatriz Romero; Javier Bezos; Karen Stevenson; Ana Mateos; Lucas Domínguez
Journal:  J Clin Microbiol       Date:  2009-05-13       Impact factor: 5.948

6.  Novel Single Nucleotide Polymorphism-Based Assay for Genotyping Mycobacterium avium subsp. paratuberculosis.

Authors:  Célia Leão; Robert J Goldstone; Josephine Bryant; Joyce McLuckie; João Inácio; David G E Smith; Karen Stevenson
Journal:  J Clin Microbiol       Date:  2015-12-16       Impact factor: 5.948

7.  Inter- and intra-subtype genotypic differences that differentiate Mycobacterium avium subspecies paratuberculosis strains.

Authors:  Franck Biet; Iker A Sevilla; Thierry Cochard; Louise H Lefrançois; Joseba M Garrido; Ian Heron; Ramón A Juste; Joyce McLuckie; Virginie C Thibault; Philip Supply; Desmond M Collins; Marcel A Behr; Karen Stevenson
Journal:  BMC Microbiol       Date:  2012-11-19       Impact factor: 3.605

8.  Exploring the zoonotic potential of Mycobacterium avium subspecies paratuberculosis through comparative genomics.

Authors:  James W Wynne; Tim J Bull; Torsten Seemann; Dieter M Bulach; Josef Wagner; Carl D Kirkwood; Wojtek P Michalski
Journal:  PLoS One       Date:  2011-07-22       Impact factor: 3.240

9.  Genome-wide analysis of the emerging infection with Mycobacterium avium subspecies paratuberculosis in the Arabian camels (Camelus dromedarius).

Authors:  Pallab Ghosh; Chungyi Hsu; Essam J Alyamani; Maher M Shehata; Musaad A Al-Dubaib; Abdulmohsen Al-Naeem; Mahmoud Hashad; Osama M Mahmoud; Khalid B J Alharbi; Khalid Al-Busadah; Abdulaziz M Al-Swailem; Adel M Talaat
Journal:  PLoS One       Date:  2012-02-29       Impact factor: 3.240

10.  Occurrence of Mycobacterium avium subspecies paratuberculosis across host species and European countries with evidence for transmission between wildlife and domestic ruminants.

Authors:  Karen Stevenson; Julio Alvarez; Douwe Bakker; Franck Biet; Lucia de Juan; Susan Denham; Zoi Dimareli; Karen Dohmann; Gerald F Gerlach; Ian Heron; Marketa Kopecna; Linda May; Ivo Pavlik; J Michael Sharp; Virginie C Thibault; Peter Willemsen; Ruth N Zadoks; Alastair Greig
Journal:  BMC Microbiol       Date:  2009-10-07       Impact factor: 3.605
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