Literature DB >> 19439536

Single nucleotide polymorphisms in the IS900 sequence of Mycobacterium avium subsp. paratuberculosis are strain type specific.

Elena Castellanos1, Alicia Aranaz, Lucia de Juan, Julio Alvarez, Sabrina Rodríguez, Beatriz Romero, Javier Bezos, Karen Stevenson, Ana Mateos, Lucas Domínguez.   

Abstract

Insertion sequence IS900 is used as a target for the identification of Mycobacterium avium subsp. paratuberculosis. Previous reports have revealed single nucleotide polymorphisms within IS900. This study, which analyzed the IS900 sequences of a panel of isolates representing M. avium subsp. paratuberculosis strain types I, II, and III, revealed conserved type-specific polymorphisms that could be utilized as a tool for diagnostic and epidemiological purposes.

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Year:  2009        PMID： 19439536      PMCID： PMC2708469          DOI： 10.1128/JCM.00544-09

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  33 in total

1.  Mycobacterium avium subsp. paratuberculosis strains from cattle and sheep can be distinguished by a PCR test based on a novel DNA sequence difference.

Authors:  Desmond M Collins; May De Zoete; Sonia M Cavaignac
Journal:  J Clin Microbiol       Date:  2002-12       Impact factor: 5.948

2.  Mycobacterium avium subsp. paratuberculosis in lake catchments, in river water abstracted for domestic use, and in effluent from domestic sewage treatment works: diverse opportunities for environmental cycling and human exposure.

Authors:  R W Pickup; G Rhodes; T J Bull; S Arnott; K Sidi-Boumedine; M Hurley; J Hermon-Taylor
Journal:  Appl Environ Microbiol       Date:  2006-06       Impact factor: 4.792

3.  Polymorphisms in gyrA and gyrB genes among Mycobacterium avium subsp. paratuberculosis type I, II, and III isolates.

Authors:  E Castellanos; A Aranaz; B Romero; L de Juan; J Alvarez; J Bezos; S Rodríguez; K Stevenson; A Mateos; L Domínguez
Journal:  J Clin Microbiol       Date:  2007-08-01       Impact factor: 5.948

4.  An IS900-like sequence found in a Mycobacterium sp. other than Mycobacterium avium subsp. paratuberculosis.

Authors:  Stina Englund; Göran Bölske; Karl Erik Johansson
Journal:  FEMS Microbiol Lett       Date:  2002-04-09       Impact factor: 2.742

5.  Molecular epidemiology of Types I/III strains of Mycobacterium avium subspecies paratuberculosis isolated from goats and cattle.

Authors:  L de Juan; J Alvarez; A Aranaz; A Rodríguez; B Romero; J Bezos; A Mateos; L Domínguez
Journal:  Vet Microbiol       Date:  2006-02-24       Impact factor: 3.293

6.  Duplex PCR for differential identification of Mycobacterium bovis, M. avium, and M. avium subsp. paratuberculosis in formalin- fixed paraffin-embedded tissues from cattle.

Authors:  C Coetsier; P Vannuffel; N Blondeel; J F Denef; C Cocito; J L Gala
Journal:  J Clin Microbiol       Date:  2000-08       Impact factor: 5.948

7.  Sequence polymorphisms in a surface PPE protein distinguish types I, II, and III of Mycobacterium avium subsp. paratuberculosis.

Authors:  Tanya A Griffiths; Kevin Rioux; Jeroen De Buck
Journal:  J Clin Microbiol       Date:  2008-02-13       Impact factor: 5.948

8.  New variable-number tandem-repeat markers for typing Mycobacterium avium subsp. paratuberculosis and M. avium strains: comparison with IS900 and IS1245 restriction fragment length polymorphism typing.

Authors:  Virginie C Thibault; Maggy Grayon; Maria Laura Boschiroli; Christine Hubbans; Pieter Overduin; Karen Stevenson; Maria Cristina Gutierrez; Philip Supply; Franck Biet
Journal:  J Clin Microbiol       Date:  2007-05-30       Impact factor: 5.948

9.  Identification of restriction fragment length polymorphisms in DNA from Mycobacterium paratuberculosis.

Authors:  D Whipple; P Kapke; C Vary
Journal:  J Clin Microbiol       Date:  1990-11       Impact factor: 5.948

10.  Pulsed-field gel electrophoresis profile homogeneity of Mycobacterium avium subsp. paratuberculosis isolates from cattle and heterogeneity of those from sheep and goats.

Authors:  Iker Sevilla; Joseba M Garrido; Marivi Geijo; Ramon A Juste
Journal:  BMC Microbiol       Date:  2007-03-12       Impact factor: 3.605
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  8 in total

1.  Genetic evaluation of IS900 partial sequence of Mycobacterium avium subsp. paratuberculosis Brazilian isolates from bovine milk.

Authors:  Isabel Azevedo Carvalho; Victor Oliveira Silva; Pedro Marcus Pereira Vidigal; Abelardo Silva; Maria Aparecida Scatamburlo Moreira
Journal:  Trop Anim Health Prod       Date:  2012-03-16       Impact factor: 1.559

2.  Molecular identification of Mycobacterium avium subsp. silvaticum by duplex high-resolution melt analysis and subspecies-specific real-time PCR.

Authors:  Zsuzsanna Rónai; Ágnes Csivincsik; Ádám Dán
Journal:  J Clin Microbiol       Date:  2015-03-04       Impact factor: 5.948

3.  Rapid identification and differentiation of Mycobacterium avium subspecies paratuberculosis types by use of real-time PCR and high-resolution melt analysis of the MAP1506 locus.

Authors:  Elena Castellanos; Alicia Aranaz; Jeroen De Buck
Journal:  J Clin Microbiol       Date:  2010-02-03       Impact factor: 5.948

4.  Monoclonal Antibodies Bind A SNP-Sensitive Epitope that is Present Uniquely in Mycobacterium avium Subspecies Paratuberculosis.

Authors:  John P Bannantine; Judith R Stabel; Elise A Lamont; Robert E Briggs; Srinand Sreevatsan
Journal:  Front Microbiol       Date:  2011-07-26       Impact factor: 5.640

5.  Serological and Molecular Characterization of Mycobacterium avium Subsp. paratuberculosis (MAP) from Sheep, Goats, Cattle and Camels in the Eastern Province, Saudi Arabia.

Authors:  Ibrahim Elsohaby; Mahmoud Fayez; Mohamed Alkafafy; Mohamed Refaat; Theeb Al-Marri; Fanan A Alaql; Abdulaziz S Al Amer; Abdelmonem Abdallah; Ahmed Elmoslemany
Journal:  Animals (Basel)       Date:  2021-01-28       Impact factor: 2.752

6.  Whole-Genome Analysis of Mycobacterium avium subsp. paratuberculosis IS900 Insertions Reveals Strain Type-Specific Modalities.

Authors:  Cyril Conde; Marian Price-Carter; Thierry Cochard; Maxime Branger; Karen Stevenson; Richard Whittington; John P Bannantine; Franck Biet
Journal:  Front Microbiol       Date:  2021-05-10       Impact factor: 5.640

7.  Isolation of Mycobacterium avium Subsp. Paratuberculosis in the Feces and Tissue of Small Ruminants Using a Non-Automated Liquid Culture Method.

Authors:  Luigi De Grossi; Davide Santori; Antonino Barone; Silvia Abbruzzese; Matteo Ricchi; Gaetana Anita Marcario
Journal:  Animals (Basel)       Date:  2019-12-20       Impact factor: 2.752

8.  Application of Bayesian modeling for diagnostic assays of Mycobacterium avium subsp. paratuberculosis in sheep and goats flocks.

Authors:  Zahra Hemati; Eleftherios Meletis; Abdollah Derakhshandeh; Masoud Haghkhah; Polychronis Kostoulas; Shoor Vir Singh; Kundan Kumar Chaubey; Saurabh Gupta
Journal:  BMC Vet Res       Date:  2022-01-18       Impact factor: 2.741
  8 in total

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