Literature DB >> 17668317

Glyco-array technology for efficient monitoring of plant cell wall glycosyltransferase activities.

Matthew Shipp1, Ramya Nadella, Hui Gao, Vladimir Farkas, Hans Sigrist, Ahmed Faik.   

Abstract

The plant cell wall is a complex network of polysaccharides. The diversity in the linkage types connecting all monosaccharides within these polysaccharides would need a large set of glycosyltransferases to catalyze their formation. Development of a methodology that would allow monitoring of glycosyltransferase activities in an easy and high-throughput manner would help assign biochemical functions, and understand their roles in building this complex network. A microarray-based method was optimized for testing glycosyltransferases involved in plant wall biosynthesis using an alpha(1,2)fucosyltransferase involved in xyloglucan biosynthesis. The method is simple, sensitive, and easy to implement in any lab. Tamarind xyloglucan polymer and trimer, and a series of cello-oligosaccharides were immobilized on a thin-coated photo-activable glass slide. The slide with the attached sugars was then used to estimate the incorporation of [(14)C]Fuc onto xyloglucan polymer and trimer. [(14)C]-radiolabel incorporation is revealed with a standard phosphoimager scanner, after exposure of the glycochip to a phosphor screen and detection. The method proved to be sensitive enough to detect as low as 45 cpm/spot. Oriented anchoring of small oligosaccharides (trimer) was required for optimal transferase activities. The glycochip was also used to monitor and estimate xyloglucan fucosyltransferase activity in detergent-solubilized crude extracts from pea microsomes that are known to contain this enzyme activity. Our data indicate that the methodology can be used for efficient and rapid monitoring of glycosyltransferase activities involved in plant wall polysaccharides biosynthesis.

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Year:  2007        PMID: 17668317     DOI: 10.1007/s10719-007-9060-1

Source DB:  PubMed          Journal:  Glycoconj J        ISSN: 0282-0080            Impact factor:   2.916


  19 in total

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3.  The Structure of Plant Cell Walls: III. A Model of the Walls of Suspension-cultured Sycamore Cells Based on the Interconnections of the Macromolecular Components.

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4.  Immobilisation on polystyrene of diazirine derivatives of mono- and disaccharides: biological activities of modified surfaces.

Authors:  Y Chevolot; J Martins; N Milosevic; D Léonard; S Zeng; M Malissard; E G Berger; P Maier; H J Mathieu; D H Crout; H Sigrist
Journal:  Bioorg Med Chem       Date:  2001-11       Impact factor: 3.641

5.  An enzyme-linked lectin assay for alpha1,3-galactosyltransferase.

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Journal:  Anal Biochem       Date:  2000-05-01       Impact factor: 3.365

6.  Xyloglucan galactosyl- and fucosyltransferase activities from pea epicotyl microsomes.

Authors:  A Faïk; C Chileshe; J Sterling; G Maclachlan
Journal:  Plant Physiol       Date:  1997-05       Impact factor: 8.340

7.  Carbohydrate microarrays: an advanced technology for functional studies of glycans.

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10.  Glycoprofiling with micro-arrays of glycoconjugates and lectins.

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  9 in total

Review 1.  Glycan microarrays for decoding the glycome.

Authors:  Cory D Rillahan; James C Paulson
Journal:  Annu Rev Biochem       Date:  2011       Impact factor: 23.643

2.  Polysaccharide microarrays for high-throughput screening of transglycosylase activities in plant extracts.

Authors:  Ondrej Kosík; Richard P Auburn; Steven Russell; Eva Stratilová; Sona Garajová; Maria Hrmova; Vladimír Farkas
Journal:  Glycoconj J       Date:  2009-12-02       Impact factor: 2.916

Review 3.  Carbohydrate microarrays.

Authors:  Sungjin Park; Jeffrey C Gildersleeve; Ola Blixt; Injae Shin
Journal:  Chem Soc Rev       Date:  2012-11-28       Impact factor: 54.564

Review 4.  The Role of Auxin in Cell Wall Expansion.

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Journal:  Int J Mol Sci       Date:  2018-03-22       Impact factor: 5.923

5.  Versatile high resolution oligosaccharide microarrays for plant glycobiology and cell wall research.

Authors:  Henriette L Pedersen; Jonatan U Fangel; Barry McCleary; Christian Ruzanski; Maja G Rydahl; Marie-Christine Ralet; Vladimir Farkas; Laura von Schantz; Susan E Marcus; Mathias C F Andersen; Rob Field; Mats Ohlin; J Paul Knox; Mads H Clausen; William G T Willats
Journal:  J Biol Chem       Date:  2012-09-17       Impact factor: 5.157

6.  Array-assisted characterization of a fucosyltransferase required for the biosynthesis of complex core modifications of nematode N-glycans.

Authors:  Shi Yan 闫石; Sonia Serna; Niels-Christian Reichardt; Katharina Paschinger; Iain B H Wilson
Journal:  J Biol Chem       Date:  2013-06-10       Impact factor: 5.157

7.  Synthetic Carbohydrate Chemistry and Translational Medicine.

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Review 8.  Design starch: stochastic modeling of starch granule biogenesis.

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Journal:  Biochem Soc Trans       Date:  2017-07-03       Impact factor: 5.407

Review 9.  Glycan arrays: biological and medical applications.

Authors:  Pi-Hui Liang; Chung-Yi Wu; William A Greenberg; Chi-Huey Wong
Journal:  Curr Opin Chem Biol       Date:  2008-03-04       Impact factor: 8.822

  9 in total

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