Literature DB >> 17660279

Hydroxyatrazine N-ethylaminohydrolase (AtzB): an amidohydrolase superfamily enzyme catalyzing deamination and dechlorination.

Jennifer L Seffernick1, Asma Aleem, Jeffrey P Osborne, Gilbert Johnson, Michael J Sadowsky, Lawrence P Wackett.   

Abstract

Hydroxyatrazine [2-(N-ethylamino)-4-hydroxy-6-(N-isopropylamino)-1,3,5-triazine] N-ethylaminohydrolase (AtzB) is the sole enzyme known to catalyze the hydrolytic conversion of hydroxyatrazine to N-isopropylammelide. AtzB, therefore, serves as the point of intersection of multiple s-triazine biodegradative pathways and is completely essential for microbial growth on s-triazine herbicides. Here, atzB was cloned from Pseudomonas sp. strain ADP and its product was purified to homogeneity and characterized. AtzB was found to be dimeric, with subunit and holoenzyme molecular masses of 52 kDa and 105 kDa, respectively. The k(cat) and K(m) of AtzB with hydroxyatrazine as a substrate were 3 s(-1) and 20 microM, respectively. Purified AtzB had a 1:1 zinc-to-subunit stoichiometry. Sequence analysis revealed that AtzB contained the conserved mononuclear amidohydrolase superfamily active-site residues His74, His76, His245, Glu248, His280, and Asp331. An intensive in vitro investigation into the substrate specificity of AtzB revealed that 20 of the 51 compounds tested were substrates for AtzB; this allowed for the identification of specific substrate structural features required for catalysis. Substrates required a monohydroxylated s-triazine ring with a minimum of one primary or secondary amine substituent and either a chloride or amine leaving group. AtzB catalyzed both deamination and dechlorination reactions with rates within a range of one order of magnitude. This differs from AtzA and TrzN, which do not catalyze deamination reactions, and AtzC, which is not known to catalyze dechlorination reactions.

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Year:  2007        PMID: 17660279      PMCID: PMC2045197          DOI: 10.1128/JB.00630-07

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  33 in total

Review 1.  Rapid evolution of bacterial catabolic enzymes: a case study with atrazine chlorohydrolase.

Authors:  J L Seffernick; L P Wackett
Journal:  Biochemistry       Date:  2001-10-30       Impact factor: 3.162

2.  An evolutionary treasure: unification of a broad set of amidohydrolases related to urease.

Authors:  L Holm; C Sander
Journal:  Proteins       Date:  1997-05

3.  A pre-transition-state mimic of an enzyme: X-ray structure of adenosine deaminase with bound 1-deazaadenosine and zinc-activated water.

Authors:  D K Wilson; F A Quiocho
Journal:  Biochemistry       Date:  1993-02-23       Impact factor: 3.162

4.  The atzB gene of Pseudomonas sp. strain ADP encodes the second enzyme of a novel atrazine degradation pathway.

Authors:  K L Boundy-Mills; M L de Souza; R T Mandelbaum; L P Wackett; M J Sadowsky
Journal:  Appl Environ Microbiol       Date:  1997-03       Impact factor: 4.792

5.  Atrazine chlorohydrolase from Pseudomonas sp. strain ADP: gene sequence, enzyme purification, and protein characterization.

Authors:  M L de Souza; M J Sadowsky; L P Wackett
Journal:  J Bacteriol       Date:  1996-08       Impact factor: 3.490

6.  Substrate specificity and colorimetric assay for recombinant TrzN derived from Arthrobacter aurescens TC1.

Authors:  Nir Shapir; Charlotte Rosendahl; Gilbert Johnson; Marco Andreina; Michael J Sadowsky; Lawrence P Wackett
Journal:  Appl Environ Microbiol       Date:  2005-05       Impact factor: 4.792

7.  AtzC is a new member of the amidohydrolase protein superfamily and is homologous to other atrazine-metabolizing enzymes.

Authors:  M J Sadowsky; Z Tong; M de Souza; L P Wackett
Journal:  J Bacteriol       Date:  1998-01       Impact factor: 3.490

8.  Isolation and Characterization of a Pseudomonas sp. That Mineralizes the s-Triazine Herbicide Atrazine.

Authors:  R T Mandelbaum; D L Allan; L P Wackett
Journal:  Appl Environ Microbiol       Date:  1995-04       Impact factor: 4.792

9.  Self-fulfilling cavitands: packing alkyl chains into small spaces.

Authors:  Byron W Purse; Julius Rebek
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-13       Impact factor: 11.205

10.  Purification, substrate range, and metal center of AtzC: the N-isopropylammelide aminohydrolase involved in bacterial atrazine metabolism.

Authors:  Nir Shapir; Jeffrey P Osborne; Gilbert Johnson; Michael J Sadowsky; Lawrence P Wackett
Journal:  J Bacteriol       Date:  2002-10       Impact factor: 3.490

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  11 in total

1.  X-ray structure of the amidase domain of AtzF, the allophanate hydrolase from the cyanuric acid-mineralizing multienzyme complex.

Authors:  Sahil Balotra; Janet Newman; Nathan P Cowieson; Nigel G French; Peter M Campbell; Lyndall J Briggs; Andrew C Warden; Christopher J Easton; Thomas S Peat; Colin Scott
Journal:  Appl Environ Microbiol       Date:  2014-10-31       Impact factor: 4.792

2.  Plasmid localization and organization of melamine degradation genes in Rhodococcus sp. strain Mel.

Authors:  Anthony G Dodge; Lawrence P Wackett; Michael J Sadowsky
Journal:  Appl Environ Microbiol       Date:  2011-12-30       Impact factor: 4.792

3.  An unexpected vestigial protein complex reveals the evolutionary origins of an s-triazine catabolic enzyme.

Authors:  Lygie Esquirol; Thomas S Peat; Matthew Wilding; Jian-Wei Liu; Nigel G French; Carol J Hartley; Hideki Onagi; Thomas Nebl; Christopher J Easton; Janet Newman; Colin Scott
Journal:  J Biol Chem       Date:  2018-03-09       Impact factor: 5.157

4.  Bacterial ammeline metabolism via guanine deaminase.

Authors:  Jennifer L Seffernick; Anthony G Dodge; Michael J Sadowsky; John A Bumpus; Lawrence P Wackett
Journal:  J Bacteriol       Date:  2009-12-18       Impact factor: 3.490

5.  Transformation of HBCDs by Rhodococcus sp. stu-38.

Authors:  Fei Yu; Wenqi Luo; Yuyang Li; Shanshan Meng; Xianbin Lin; Lele Li; Xueying Ye; Hui Wang; Tao Peng; Tongwang Huang; Zhong Hu
Journal:  Curr Microbiol       Date:  2022-05-20       Impact factor: 2.188

6.  Thermostable cyanuric acid hydrolase from Moorella thermoacetica ATCC 39073.

Authors:  Qingyan Li; Jennifer L Seffernick; Michael J Sadowsky; Lawrence P Wackett
Journal:  Appl Environ Microbiol       Date:  2009-09-18       Impact factor: 4.792

7.  X-Ray Structure and Mutagenesis Studies of the N-Isopropylammelide Isopropylaminohydrolase, AtzC.

Authors:  Sahil Balotra; Andrew C Warden; Janet Newman; Lyndall J Briggs; Colin Scott; Thomas S Peat
Journal:  PLoS One       Date:  2015-09-21       Impact factor: 3.240

8.  Microbial changes linked to the accelerated degradation of the herbicide atrazine in a range of temperate soils.

Authors:  R L Yale; M Sapp; C J Sinclair; J W B Moir
Journal:  Environ Sci Pollut Res Int       Date:  2017-01-20       Impact factor: 4.223

Review 9.  A synthesis of the effects of pesticides on microbial persistence in aquatic ecosystems.

Authors:  Zachery R Staley; Valerie J Harwood; Jason R Rohr
Journal:  Crit Rev Toxicol       Date:  2015-11-13       Impact factor: 6.184

10.  The structure of the hexameric atrazine chlorohydrolase AtzA.

Authors:  T S Peat; J Newman; S Balotra; D Lucent; A C Warden; C Scott
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-02-26
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