Literature DB >> 17656312

RNA quadruplex-based modulation of gene expression.

Markus Wieland1, Jörg S Hartig.   

Abstract

RNA-based modules such as riboswitches represent straightforward and simplified approaches for the regulation of gene expression, as no additional proteins are needed. G-rich sequences are known to adopt stable four-stranded structures, and such quadruplexes have been suspected to play important roles in key functions such as the control of gene expression. Here we demonstrate that RNA quadruplexes readily form in vivo. We have constructed mRNA-based G-rich elements that mask the ribosome binding site by folding into four-stranded structures. The suppression of gene expression correlates with the stability of inserted G quadruplexes. Moreover, quadruplexes with moderate stability respond to changes in temperature, thus behaving as artificial RNA thermometers. In conclusion, we introduce tuneable mRNA-based devices that enable modulation of gene expression by a predictable but thus far unknown mechanism.

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Year:  2007        PMID: 17656312     DOI: 10.1016/j.chembiol.2007.06.005

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  66 in total

Review 1.  Bacterial RNA thermometers: molecular zippers and switches.

Authors:  Jens Kortmann; Franz Narberhaus
Journal:  Nat Rev Microbiol       Date:  2012-03-16       Impact factor: 60.633

2.  Translational repression of the disintegrin and metalloprotease ADAM10 by a stable G-quadruplex secondary structure in its 5'-untranslated region.

Authors:  Sven Lammich; Frits Kamp; Judith Wagner; Brigitte Nuscher; Sonja Zilow; Ann-Katrin Ludwig; Michael Willem; Christian Haass
Journal:  J Biol Chem       Date:  2011-11-07       Impact factor: 5.157

3.  Higher-order RNA structural requirements and small-molecule induction of tombusvirus subgenomic mRNA transcription.

Authors:  Sheng Wang; Leyla Mortazavi; K Andrew White
Journal:  J Virol       Date:  2008-02-06       Impact factor: 5.103

4.  Structure of long telomeric RNA transcripts: the G-rich RNA forms a compact repeating structure containing G-quartets.

Authors:  Adrian Randall; Jack D Griffith
Journal:  J Biol Chem       Date:  2009-03-26       Impact factor: 5.157

5.  Fragile X mental retardation protein recognizes a G quadruplex structure within the survival motor neuron domain containing 1 mRNA 5'-UTR.

Authors:  Damian S McAninch; Ashley M Heinaman; Cara N Lang; Kathryn R Moss; Gary J Bassell; Mihaela Rita Mihailescu; Timothy L Evans
Journal:  Mol Biosyst       Date:  2017-07-25

Review 6.  Microbial thermosensors.

Authors:  Birgit Klinkert; Franz Narberhaus
Journal:  Cell Mol Life Sci       Date:  2009-05-12       Impact factor: 9.261

7.  Inhibition of translation in living eukaryotic cells by an RNA G-quadruplex motif.

Authors:  Amit Arora; Mariola Dutkiewicz; Vinod Scaria; Manoj Hariharan; Souvik Maiti; Jens Kurreck
Journal:  RNA       Date:  2008-05-30       Impact factor: 4.942

8.  Investigation of mRNA quadruplex formation in Escherichia coli.

Authors:  Markus Wieland; Jörg S Hartig
Journal:  Nat Protoc       Date:  2009-10-22       Impact factor: 13.491

9.  Role of the central cations in the mechanical unfolding of DNA and RNA G-quadruplexes.

Authors:  Ana Elisa Bergues-Pupo; J Ricardo Arias-Gonzalez; María Carmen Morón; Alessandro Fiasconaro; Fernando Falo
Journal:  Nucleic Acids Res       Date:  2015-07-13       Impact factor: 16.971

10.  The quadruplex r(CGG)n destabilizing cationic porphyrin TMPyP4 cooperates with hnRNPs to increase the translation efficiency of fragile X premutation mRNA.

Authors:  Noa Ofer; Pnina Weisman-Shomer; Jeny Shklover; Michael Fry
Journal:  Nucleic Acids Res       Date:  2009-03-09       Impact factor: 16.971

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