Literature DB >> 22065584

Translational repression of the disintegrin and metalloprotease ADAM10 by a stable G-quadruplex secondary structure in its 5'-untranslated region.

Sven Lammich1, Frits Kamp, Judith Wagner, Brigitte Nuscher, Sonja Zilow, Ann-Katrin Ludwig, Michael Willem, Christian Haass.   

Abstract

Anti-amyloidogenic processing of the amyloid precursor protein APP by α-secretase prevents formation of the amyloid-β peptide, which accumulates in senile plaques of Alzheimer disease patients. α-Secretase belongs to the family of a disintegrin and metalloproteases (ADAMs), and ADAM10 is the primary candidate for this anti-amyloidogenic activity. We recently demonstrated that ADAM10 translation is repressed by its 5'-UTR and that in particular the first half of ADAM10 5'-UTR is responsible for translational repression. Here, we asked whether specific sequence motifs exist in the ADAM10 5'-UTR that are able to form complex secondary structures and thus potentially inhibit ADAM10 translation. Using circular dichroism spectroscopy, we demonstrate that a G-rich region between nucleotides 66 and 94 of the ADAM10 5'-UTR forms a highly stable, intramolecular, parallel G-quadruplex secondary structure under physiological conditions. Mutation of guanines in this sequence abrogates the formation of the G-quadruplex structure. Although the G-quadruplex structure efficiently inhibits translation of a luciferase reporter in in vitro translation assays and in living cells, inhibition of G-quadruplex formation fails to do so. Moreover, expression of ADAM10 was similarly repressed by the G-quadruplex. Mutation of the G-quadruplex motif results in a significant increase of ADAM10 levels and consequently APPsα secretion. Thus, we identified a critical RNA secondary structure within the 5'-UTR, which contributes to the translational repression of ADAM10.

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Year:  2011        PMID: 22065584      PMCID: PMC3248004          DOI: 10.1074/jbc.M111.296921

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  90 in total

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Authors:  H Koike; S Tomioka; H Sorimachi; T C Saido; K Maruyama; A Okuyama; A Fujisawa-Sehara; S Ohno; K Suzuki; S Ishiura
Journal:  Biochem J       Date:  1999-10-15       Impact factor: 3.857

2.  Engineering the quadruplex fold: nucleoside conformation determines both folding topology and molecularity in guanine quadruplexes.

Authors:  Chung-Fei Tang; Richard H Shafer
Journal:  J Am Chem Soc       Date:  2006-05-03       Impact factor: 15.419

Review 3.  The implications of structured 5' untranslated regions on translation and disease.

Authors:  Becky M Pickering; Anne E Willis
Journal:  Semin Cell Dev Biol       Date:  2004-12-10       Impact factor: 7.727

4.  Energy inhibition elevates beta-secretase levels and activity and is potentially amyloidogenic in APP transgenic mice: possible early events in Alzheimer's disease pathogenesis.

Authors:  Rodney A Velliquette; Tracy O'Connor; Robert Vassar
Journal:  J Neurosci       Date:  2005-11-23       Impact factor: 6.167

5.  The acute box cis-element in human heavy ferritin mRNA 5'-untranslated region is a unique translation enhancer that binds poly(C)-binding proteins.

Authors:  Andrew M Thomson; Catherine M Cahill; Hyun-Hee Cho; Kristin D Kassachau; Michael R Epis; Kenneth R Bridges; Peter J Leedman; Jack T Rogers
Journal:  J Biol Chem       Date:  2005-06-20       Impact factor: 5.157

6.  FMRP interferes with the Rac1 pathway and controls actin cytoskeleton dynamics in murine fibroblasts.

Authors:  Marie Castets; Céline Schaeffer; Elias Bechara; Annette Schenck; Edward W Khandjian; Sylvie Luche; Hervé Moine; Thierry Rabilloud; Jean-Louis Mandel; Barbara Bardoni
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7.  A conserved quadruplex motif located in a transcription activation site of the human c-kit oncogene.

Authors:  Himesh Fernando; Anthony P Reszka; Julian Huppert; Sylvain Ladame; Sarah Rankin; Ashok R Venkitaraman; Stephen Neidle; Shankar Balasubramanian
Journal:  Biochemistry       Date:  2006-06-27       Impact factor: 3.162

8.  GRSDB: a database of quadruplex forming G-rich sequences in alternatively processed mammalian pre-mRNA sequences.

Authors:  Rumen Kostadinov; Nishtha Malhotra; Manuel Viotti; Robert Shine; Lawrence D'Antonio; Paramjeet Bagga
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

9.  G-quadruplex formation within the promoter of the KRAS proto-oncogene and its effect on transcription.

Authors:  Susanna Cogoi; Luigi E Xodo
Journal:  Nucleic Acids Res       Date:  2006-05-10       Impact factor: 16.971

10.  Quadfinder: server for identification and analysis of quadruplex-forming motifs in nucleotide sequences.

Authors:  Vinod Scaria; Manoj Hariharan; Amit Arora; Souvik Maiti
Journal:  Nucleic Acids Res       Date:  2006-07-01       Impact factor: 16.971

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  27 in total

1.  G-Quadruplexes in Human Ribosomal RNA.

Authors:  Santi Mestre-Fos; Petar I Penev; Suttipong Suttapitugsakul; Michael Hu; Chieri Ito; Anton S Petrov; Roger M Wartell; Ronghu Wu; Loren Dean Williams
Journal:  J Mol Biol       Date:  2019-03-15       Impact factor: 5.469

2.  Fe2+ binds iron responsive element-RNA, selectively changing protein-binding affinities and regulating mRNA repression and activation.

Authors:  Jia Ma; Suranjana Haldar; Mateen A Khan; Sohani Das Sharma; William C Merrick; Elizabeth C Theil; Dixie J Goss
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-14       Impact factor: 11.205

3.  Translational repression of cyclin D3 by a stable G-quadruplex in its 5' UTR: implications for cell cycle regulation.

Authors:  Heng-You Weng; Hui-Lin Huang; Pan-Pan Zhao; Hui Zhou; Liang-Hu Qu
Journal:  RNA Biol       Date:  2012-08-01       Impact factor: 4.652

Review 4.  The regulation and functions of DNA and RNA G-quadruplexes.

Authors:  Dhaval Varshney; Jochen Spiegel; Katherine Zyner; David Tannahill; Shankar Balasubramanian
Journal:  Nat Rev Mol Cell Biol       Date:  2020-04-20       Impact factor: 94.444

Review 5.  Small molecule targeting of biologically relevant RNA tertiary and quaternary structures.

Authors:  Martina Zafferani; Amanda E Hargrove
Journal:  Cell Chem Biol       Date:  2021-04-05       Impact factor: 8.116

Review 6.  5'-UTR RNA G-quadruplexes: translation regulation and targeting.

Authors:  Anthony Bugaut; Shankar Balasubramanian
Journal:  Nucleic Acids Res       Date:  2012-02-20       Impact factor: 16.971

7.  QGRS-H Predictor: a web server for predicting homologous quadruplex forming G-rich sequence motifs in nucleotide sequences.

Authors:  Camille Menendez; Scott Frees; Paramjeet S Bagga
Journal:  Nucleic Acids Res       Date:  2012-05-10       Impact factor: 16.971

8.  The immediate upstream region of the 5'-UTR from the AUG start codon has a pronounced effect on the translational efficiency in Arabidopsis thaliana.

Authors:  Younghyun Kim; Goeun Lee; Eunhyun Jeon; Eun Ju Sohn; Yongjik Lee; Hyangju Kang; Dong Wook Lee; Dae Heon Kim; Inhwan Hwang
Journal:  Nucleic Acids Res       Date:  2013-09-30       Impact factor: 16.971

9.  Role of conserved cis-regulatory elements in the post-transcriptional regulation of the human MECP2 gene involved in autism.

Authors:  Joetsaroop S Bagga; Lawrence A D'Antonio
Journal:  Hum Genomics       Date:  2013-09-16       Impact factor: 4.639

10.  QGRS-Conserve: a computational method for discovering evolutionarily conserved G-quadruplex motifs.

Authors:  Scott Frees; Camille Menendez; Matt Crum; Paramjeet S Bagga
Journal:  Hum Genomics       Date:  2014-05-01       Impact factor: 4.639

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