Literature DB >> 17634594

Energy systems for ATP regeneration in cell-free protein synthesis reactions.

Kara A Calhoun1, James R Swartz.   

Abstract

Supplying energy for cell-free protein synthesis reactions is one of the biggest challenges to the success of these systems. Oftentimes, short reaction duration is attributed to an unstable energy source. Traditional cell-free reactions use a compound with a high-energy phosphate bond, such as phosphoenolpyruvate, to generate the ATP required to drive transcription and translation. However, recent work has led to better understanding and activation of the complex metabolism that can occur during cell-free reactions. We are now able to generate ATP using energy sources that are less expensive and more stable. These energy sources generally involve multistep enzymatic reactions or recreate entire energy-generating pathways, such as glycolysis and oxidative phosphorylation. We describe the various types of energy sources used in cell-free reactions, give examples of the major classes, and demonstrate protocols for successful use of three recently developed energy systems: PANOxSP, cytomim, and glucose.

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Year:  2007        PMID: 17634594     DOI: 10.1007/978-1-59745-388-2_1

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  17 in total

1.  Mass spectrometry-guided refinement of chemical energy buffers.

Authors:  T-R Chen; P L Urban
Journal:  Proc Math Phys Eng Sci       Date:  2016-06       Impact factor: 2.704

2.  The geometry of multisite phosphorylation.

Authors:  Arjun Kumar Manrai; Jeremy Gunawardena
Journal:  Biophys J       Date:  2008-10-10       Impact factor: 4.033

Review 3.  Cell-free protein synthesis: the state of the art.

Authors:  James W Whittaker
Journal:  Biotechnol Lett       Date:  2012-10-21       Impact factor: 2.461

Review 4.  Synthetic cells in biomedical applications.

Authors:  Wakana Sato; Tomasz Zajkowski; Felix Moser; Katarzyna P Adamala
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2021-11-01

5.  Enzyme alchemy: cell-free synthetic biochemistry for natural products.

Authors:  Simon J Moore
Journal:  Emerg Top Life Sci       Date:  2019-11-11

6.  RNAi factors are present and active in human cell nuclei.

Authors:  Keith T Gagnon; Liande Li; Yongjun Chu; Bethany A Janowski; David R Corey
Journal:  Cell Rep       Date:  2014-01-02       Impact factor: 9.423

7.  High-throughput preparation methods of crude extract for robust cell-free protein synthesis.

Authors:  Yong-Chan Kwon; Michael C Jewett
Journal:  Sci Rep       Date:  2015-03-02       Impact factor: 4.379

8.  Site-Specific Cleavage of Ribosomal RNA in Escherichia coli-Based Cell-Free Protein Synthesis Systems.

Authors:  Jurek Failmezger; Robert Nitschel; Andrés Sánchez-Kopper; Michael Kraml; Martin Siemann-Herzberg
Journal:  PLoS One       Date:  2016-12-19       Impact factor: 3.240

Review 9.  Cell-free synthetic biology for in vitro prototype engineering.

Authors:  Simon J Moore; James T MacDonald; Paul S Freemont
Journal:  Biochem Soc Trans       Date:  2017-06-15       Impact factor: 5.407

Review 10.  Bacterial cell-free expression technology to in vitro systems engineering and optimization.

Authors:  Filippo Caschera
Journal:  Synth Syst Biotechnol       Date:  2017-08-07
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