Literature DB >> 28090247

OPTIMAL PARAMETER MAP ESTIMATION FOR SHAPE REPRESENTATION: A GENERATIVE APPROACH.

Shireen Y Elhabian1, Praful Agrawal1, Ross T Whitaker1.   

Abstract

Probabilistic label maps are a useful tool for important medical image analysis tasks such as segmentation, shape analysis, and atlas building. Existing methods typically rely on blurred signed distance maps or smoothed label maps to model uncertainties and shape variabilities, which do not conform to any generative model or estimation process, and are therefore suboptimal. In this paper, we propose to learn probabilistic label maps using a generative model on given set of binary label maps. The proposed approach generalizes well on unseen data while simultaneously capturing the variability in the training samples. Efficiency of the proposed approach is demonstrated for consensus generation and shape-based clustering using synthetic datasets as well as left atrial segmentations from late-gadolinium enhancement MRI.

Entities:  

Keywords:  consensus generation; generative models; parameter map; probabilistic labeling; shape representation

Year:  2016        PMID: 28090247      PMCID: PMC5228593          DOI: 10.1109/ISBI.2016.7493353

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  14 in total

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3.  Using the logarithm of odds to define a vector space on probabilistic atlases.

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4.  Homeomorphic brain image segmentation with topological and statistical atlases.

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5.  Computing average shaped tissue probability templates.

Authors:  John Ashburner; Karl J Friston
Journal:  Neuroimage       Date:  2008-12-24       Impact factor: 6.556

6.  A spatio-temporal latent atlas for semi-supervised learning of fetal brain segmentations and morphological age estimation.

Authors:  Eva Dittrich; Tammy Riklin Raviv; Gregor Kasprian; René Donner; Peter C Brugger; Daniela Prayer; Georg Langs
Journal:  Med Image Anal       Date:  2013-08-30       Impact factor: 8.545

7.  A generic geometric transformation that unifies a wide range of natural and abstract shapes.

Authors:  Johan Gielis
Journal:  Am J Bot       Date:  2003-03       Impact factor: 3.844

8.  A unified framework for cross-modality multi-atlas segmentation of brain MRI.

Authors:  Juan Eugenio Iglesias; Mert Rory Sabuncu; Koen Van Leemput
Journal:  Med Image Anal       Date:  2013-08-19       Impact factor: 8.545

9.  A spatiotemporal atlas of MR intensity, tissue probability and shape of the fetal brain with application to segmentation.

Authors:  Piotr A Habas; Kio Kim; James M Corbett-Detig; Francois Rousseau; Orit A Glenn; A James Barkovich; Colin Studholme
Journal:  Neuroimage       Date:  2010-06-30       Impact factor: 6.556

10.  Multi-Atlas Segmentation with Joint Label Fusion.

Authors:  Hongzhi Wang; Jung W Suh; Sandhitsu R Das; John B Pluta; Caryne Craige; Paul A Yushkevich
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2012-06-26       Impact factor: 6.226

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  1 in total

1.  An Optimal, Generative Model for Estimating Multi-Label Probabilistic Maps.

Authors:  Praful Agrawal; Ross T Whitaker; Shireen Y Elhabian
Journal:  IEEE Trans Med Imaging       Date:  2020-01-23       Impact factor: 10.048

  1 in total

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