Literature DB >> 17631246

Standards for reporting bioscience data: a forward look.

Chris F Taylor1.   

Abstract

Groups representing a number of domains in the life sciences have been developing specifications and resources for the description and transmission of data, including those produced by (high-throughput) omics technologies. Although these developments are individually valuable, there is now a need for coordination to avoid the problem of a multiplicity of competing candidate standards. Three ongoing collaborative projects (FuGE, OBI and MIBBI) offer the promise of support for truly integrated, cross-domain informatics solutions. This article briefly summarizes the status quo with respect to biological and biomedical data standards, and offers an assessment of coming developments.

Mesh:

Year:  2007        PMID: 17631246     DOI: 10.1016/j.drudis.2007.05.006

Source DB:  PubMed          Journal:  Drug Discov Today        ISSN: 1359-6446            Impact factor:   7.851


  6 in total

1.  The State of Data in Healthcare: Path Towards Standardization.

Authors:  Keith Feldman; Reid A Johnson; Nitesh V Chawla
Journal:  J Healthc Inform Res       Date:  2018-05-22

2.  Planning the human variome project: the Spain report.

Authors:  Jim Kaput; Richard G H Cotton; Lauren Hardman; Michael Watson; Aida I Al Aqeel; Jumana Y Al-Aama; Fahd Al-Mulla; Santos Alonso; Stefan Aretz; Arleen D Auerbach; Bharati Bapat; Inge T Bernstein; Jong Bhak; Stacey L Bleoo; Helmut Blöcker; Steven E Brenner; John Burn; Mariona Bustamante; Rita Calzone; Anne Cambon-Thomsen; Michele Cargill; Paola Carrera; Lawrence Cavedon; Yoon Shin Cho; Yeun-Jun Chung; Mireille Claustres; Garry Cutting; Raymond Dalgleish; Johan T den Dunnen; Carlos Díaz; Steven Dobrowolski; M Rosário N dos Santos; Rosemary Ekong; Simon B Flanagan; Paul Flicek; Yoichi Furukawa; Maurizio Genuardi; Ho Ghang; Maria V Golubenko; Marc S Greenblatt; Ada Hamosh; John M Hancock; Ross Hardison; Terence M Harrison; Robert Hoffmann; Rania Horaitis; Heather J Howard; Carol Isaacson Barash; Neskuts Izagirre; Jongsun Jung; Toshio Kojima; Sandrine Laradi; Yeon-Su Lee; Jong-Young Lee; Vera L Gil-da-Silva-Lopes; Finlay A Macrae; Donna Maglott; Makia J Marafie; Steven G E Marsh; Yoichi Matsubara; Ludwine M Messiaen; Gabriela Möslein; Mihai G Netea; Melissa L Norton; Peter J Oefner; William S Oetting; James C O'Leary; Ana Maria Oller de Ramirez; Mark H Paalman; Jillian Parboosingh; George P Patrinos; Giuditta Perozzi; Ian R Phillips; Sue Povey; Suyash Prasad; Ming Qi; David J Quin; Rajkumar S Ramesar; C Sue Richards; Judith Savige; Dagmar G Scheible; Rodney J Scott; Daniela Seminara; Elizabeth A Shephard; Rolf H Sijmons; Timothy D Smith; María-Jesús Sobrido; Toshihiro Tanaka; Sean V Tavtigian; Graham R Taylor; Jon Teague; Thoralf Töpel; Mollie Ullman-Cullere; Joji Utsunomiya; Henk J van Kranen; Mauno Vihinen; Elizabeth Webb; Thomas K Weber; Meredith Yeager; Young I Yeom; Seon-Hee Yim; Hyang-Sook Yoo
Journal:  Hum Mutat       Date:  2009-04       Impact factor: 4.878

3.  Recombinant protein quality evaluation: proposal for a minimal information standard.

Authors:  Ashley M Buckle; Mark A Bate; Steve Androulakis; Mario Cinquanta; Jerome Basquin; Fabien Bonneau; Deb K Chatterjee; Davide Cittaro; Susanne Gräslund; Alicja Gruszka; Rebecca Page; Sabine Suppmann; Jun X Wheeler; Deborah Agostini; Mike Taussig; Chris F Taylor; Stephen P Bottomley; Antonio Villaverde; Ario de Marco
Journal:  Stand Genomic Sci       Date:  2011-11-22

4.  Guidelines for information about therapy experiments: a proposal on best practice for recording experimental data on cancer therapy.

Authors:  Alejandra N González-Beltrán; May Y Yong; Gairin Dancey; Richard Begent
Journal:  BMC Res Notes       Date:  2012-01-06

Review 5.  Methodological challenges and analytic opportunities for modeling and interpreting Big Healthcare Data.

Authors:  Ivo D Dinov
Journal:  Gigascience       Date:  2016-02-25       Impact factor: 6.524

6.  Minimal information: an urgent need to assess the functional reliability of recombinant proteins used in biological experiments.

Authors:  Ario de Marco
Journal:  Microb Cell Fact       Date:  2008-07-23       Impact factor: 5.328

  6 in total

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