Literature DB >> 17625166

Deinococcus peraridilitoris sp. nov., isolated from a coastal desert.

Fred A Rainey1, Margarida Ferreira2, M Fernanda Nobre3, Keren Ray1, Danielle Bagaley1, Ashlee M Earl1, John R Battista1, Benito Gómez-Silva4, Christopher P McKay5, Milton S da Costa2.   

Abstract

Three ionizing-radiation-resistant bacterial strains (designated KR-196, KR-198 and KR-200(T)) were isolated from a sample of arid soil collected from a coastal desert in Chile. The soil sample was irradiated before serial dilution plating was performed using one-tenth-strength plate count agar. Phylogenetic analysis of the 16S rRNA gene sequences showed these organisms to represent a novel species of the genus Deinococcus, having sequence similarities of 87.3-90.8 % with respect to recognized Deinococcus species. Strains KR-196, KR-198 and KR-200(T) were aerobic and showed optimum growth at 30 degrees C and pH 6.5-8.0. The major respiratory menaquinone was MK-8. The predominant fatty acids in these strains were 16 : 1 omega 7c, 16 : 0, 15 : 1 omega 6c, 17 : 0 and 18 : 0. The DNA G+C content of strain KR-200(T) was 63.9 mol%. Strains KR-196, KR-198 and KR-200(T) were found to be resistant to >10 kGy gamma radiation. On the basis of the phylogenetic, chemotaxonomic and phenotypic data, strain KR-200(T) represents a novel species of the genus Deinococcus, for which the name Deinococcus peraridilitoris sp. nov. is proposed. The type strain is KR-200(T) (=LMG 22246(T)=CIP 109416(T)).

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Year:  2007        PMID: 17625166     DOI: 10.1099/ijs.0.64956-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  12 in total

Review 1.  Oxidative stress resistance in Deinococcus radiodurans.

Authors:  Dea Slade; Miroslav Radman
Journal:  Microbiol Mol Biol Rev       Date:  2011-03       Impact factor: 11.056

2.  Iodotyrosine deiodinase: a unique flavoprotein present in organisms of diverse phyla.

Authors:  Abhishek Phatarphekar; Jennifer M Buss; Steven E Rokita
Journal:  Mol Biosyst       Date:  2014-01

3.  Radiation desiccation response motif-like sequences are involved in transcriptional activation of the Deinococcal ssb gene by ionizing radiation but not by desiccation.

Authors:  Aman Kumar Ujaoney; Akhilesh A Potnis; Pratiksha Kane; Rita Mukhopadhyaya; Shree Kumar Apte
Journal:  J Bacteriol       Date:  2010-08-27       Impact factor: 3.490

Review 4.  Conservation and diversity of radiation and oxidative stress resistance mechanisms in Deinococcus species.

Authors:  Sangyong Lim; Jong-Hyun Jung; Laurence Blanchard; Arjan de Groot
Journal:  FEMS Microbiol Rev       Date:  2019-01-01       Impact factor: 16.408

5.  Iso-superoxide dismutase in Deinococcus grandis, a UV resistant bacterium.

Authors:  Na-Rae Yun; Young Nam Lee
Journal:  J Microbiol       Date:  2009-05-02       Impact factor: 3.422

6.  Complete genome sequence of Deinococcus maricopensis type strain (LB-34).

Authors:  Rüdiger Pukall; Ahmet Zeytun; Susan Lucas; Alla Lapidus; Nancy Hammon; Shweta Deshpande; Matt Nolan; Jan-Fang Cheng; Sam Pitluck; Konstantinos Liolios; Ioanna Pagani; Natalia Mikhailova; Natalia Ivanova; Konstantinos Mavromatis; Amrita Pati; Roxane Tapia; Cliff Han; Lynne Goodwin; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; Evelyne-Marie Brambilla; Manfred Rohde; Markus Göker; J Chris Detter; Tanja Woyke; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk
Journal:  Stand Genomic Sci       Date:  2011-04-25

7.  Exploration of Deinococcus-Thermus molecular diversity by novel group-specific PCR primers.

Authors:  Nicolas Theodorakopoulos; Dipankar Bachar; Richard Christen; Karine Alain; Virginie Chapon
Journal:  Microbiologyopen       Date:  2013-08-29       Impact factor: 3.139

8.  DrwH, a novel WHy domain-containing hydrophobic LEA5C protein from Deinococcus radiodurans, protects enzymatic activity under oxidative stress.

Authors:  Shijie Jiang; Jin Wang; Xiaoli Liu; Yingying Liu; Cui Guo; Liwen Zhang; Jiahui Han; Xiaoli Wu; Dong Xue; Ahmed E Gomaa; Shuai Feng; Heng Zhang; Yun Chen; Shuzhen Ping; Ming Chen; Wei Zhang; Liang Li; Zhengfu Zhou; Kaijing Zuo; Xufeng Li; Yi Yang; Min Lin
Journal:  Sci Rep       Date:  2017-08-24       Impact factor: 4.379

9.  Elevated Rate of Genome Rearrangements in Radiation-Resistant Bacteria.

Authors:  Jelena Repar; Fran Supek; Tin Klanjscek; Tobias Warnecke; Ksenija Zahradka; Davor Zahradka
Journal:  Genetics       Date:  2017-02-10       Impact factor: 4.562

Review 10.  Living at the Frontiers of Life: Extremophiles in Chile and Their Potential for Bioremediation.

Authors:  Roberto Orellana; Constanza Macaya; Guillermo Bravo; Flavia Dorochesi; Andrés Cumsille; Ricardo Valencia; Claudia Rojas; Michael Seeger
Journal:  Front Microbiol       Date:  2018-10-30       Impact factor: 5.640

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