Literature DB >> 17616603

Genetic code ambiguity confers a selective advantage on Acinetobacter baylyi.

Jamie M Bacher1, William F Waas, David Metzgar, Valérie de Crécy-Lagard, Paul Schimmel.   

Abstract

A primitive genetic code, composed of a smaller set of amino acids, may have expanded via recursive periods of genetic code ambiguity that were followed by specificity. Here we model a step in this process by showing how genetic code ambiguity could result in an enhanced growth rate in Acinetobacter baylyi.

Entities:  

Mesh:

Year:  2007        PMID: 17616603      PMCID: PMC1951902          DOI: 10.1128/JB.00622-07

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  18 in total

1.  The triplet code from first principles.

Authors:  E N Trifonov
Journal:  J Biomol Struct Dyn       Date:  2004-08

2.  Artificially ambiguous genetic code confers growth yield advantage.

Authors:  V Pezo; D Metzgar; T L Hendrickson; W F Waas; S Hazebrouck; V Döring; P Marlière; P Schimmel; V De Crécy-Lagard
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-26       Impact factor: 11.205

3.  Global incorporation of unnatural amino acids in Escherichia coli.

Authors:  Jamie M Bacher; Andrew D Ellington
Journal:  Methods Mol Biol       Date:  2007

4.  Rapid deacylation by isoleucyl transfer ribonucleic acid synthetase of isoleucine-specific transfer ribonucleic acid aminoacylated with valine.

Authors:  E W Eldred; P R Schimmel
Journal:  J Biol Chem       Date:  1972-05-10       Impact factor: 5.157

5.  The frequency of errors in protein biosynthesis.

Authors:  R B Loftfield; D Vanderjagt
Journal:  Biochem J       Date:  1972-08       Impact factor: 3.857

6.  Transfer ribonucleic acid-induced hydrolysis of valyladenylate bound to isoleucyl ribonucleic acid synthetase.

Authors:  A N Baldwin; P Berg
Journal:  J Biol Chem       Date:  1966-02-25       Impact factor: 5.157

7.  Mutational isolation of a sieve for editing in a transfer RNA synthetase.

Authors:  E Schmidt; P Schimmel
Journal:  Science       Date:  1994-04-08       Impact factor: 47.728

8.  Transfer RNA mutation and the malleability of the genetic code.

Authors:  D W Schultz; M Yarus
Journal:  J Mol Biol       Date:  1994-02-04       Impact factor: 5.469

9.  Selection and characterization of Escherichia coli variants capable of growth on an otherwise toxic tryptophan analogue.

Authors:  J M Bacher; A D Ellington
Journal:  J Bacteriol       Date:  2001-09       Impact factor: 3.490

10.  Acinetobacter sp. ADP1: an ideal model organism for genetic analysis and genome engineering.

Authors:  David Metzgar; Jamie M Bacher; Valérie Pezo; John Reader; Volker Döring; Paul Schimmel; Philippe Marlière; Valérie de Crécy-Lagard
Journal:  Nucleic Acids Res       Date:  2004-10-28       Impact factor: 16.971

View more
  22 in total

Review 1.  Cellular mechanisms that control mistranslation.

Authors:  Noah M Reynolds; Beth A Lazazzera; Michael Ibba
Journal:  Nat Rev Microbiol       Date:  2010-12       Impact factor: 60.633

2.  Proteome evolution and the metabolic origins of translation and cellular life.

Authors:  Derek Caetano-Anollés; Kyung Mo Kim; Jay E Mittenthal; Gustavo Caetano-Anollés
Journal:  J Mol Evol       Date:  2010-11-17       Impact factor: 2.395

3.  CP1-dependent partitioning of pretransfer and posttransfer editing in leucyl-tRNA synthetase.

Authors:  Michal T Boniecki; Michael T Vu; Aswini K Betha; Susan A Martinis
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-19       Impact factor: 11.205

Review 4.  Development of tRNA synthetases and connection to genetic code and disease.

Authors:  Paul Schimmel
Journal:  Protein Sci       Date:  2008-09-02       Impact factor: 6.725

5.  Fidelity escape by the unnatural amino acid β-hydroxynorvaline: an efficient substrate for Escherichia coli threonyl-tRNA synthetase with toxic effects on growth.

Authors:  Anand Minajigi; Bin Deng; Christopher S Francklyn
Journal:  Biochemistry       Date:  2011-01-24       Impact factor: 3.162

Review 6.  Culture history and population heterogeneity as determinants of bacterial adaptation: the adaptomics of a single environmental transition.

Authors:  Ben Ryall; Gustavo Eydallin; Thomas Ferenci
Journal:  Microbiol Mol Biol Rev       Date:  2012-09       Impact factor: 11.056

Review 7.  Function and origin of mistranslation in distinct cellular contexts.

Authors:  Michael H Schwartz; Tao Pan
Journal:  Crit Rev Biochem Mol Biol       Date:  2017-01-11       Impact factor: 8.250

Review 8.  Stress Response and Adaptation Mediated by Amino Acid Misincorporation during Protein Synthesis.

Authors:  Xiaoyun Wang; Tao Pan
Journal:  Adv Nutr       Date:  2016-07-15       Impact factor: 8.701

Review 9.  Translational fidelity and mistranslation in the cellular response to stress.

Authors:  Kyle Mohler; Michael Ibba
Journal:  Nat Microbiol       Date:  2017-08-24       Impact factor: 17.745

10.  Molecular reconstruction of a fungal genetic code alteration.

Authors:  Denisa D Mateus; João A Paredes; Yaiza Español; Lluís Ribas de Pouplana; Gabriela R Moura; Manuel A S Santos
Journal:  RNA Biol       Date:  2013-04-17       Impact factor: 4.652

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.