Literature DB >> 17611816

Question 6: coevolution theory of the genetic code: a proven theory.

Jeffrey Tze-Fei Wong1.   

Abstract

The coevolution theory proposes that primordial proteins consisted only of those amino acids readily obtainable from the prebiotic environment, representing about half the twenty encoded amino acids of today, and the missing amino acids entered the system as the code expanded along with pathways of amino acid biosynthesis. The isolation of genetic code mutants, and the antiquity of pretran synthesis revealed by the comparative genomics of tRNAs and aminoacyl-tRNA synthetases, have combined to provide a rigorous proof of the four fundamental tenets of the theory, thus solving the riddle of the structure of the universal genetic code.

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Year:  2007        PMID: 17611816     DOI: 10.1007/s11084-007-9094-1

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  21 in total

1.  Enlarging the amino acid set of Escherichia coli by infiltration of the valine coding pathway.

Authors:  V Döring; H D Mootz; L A Nangle; T L Hendrickson; V de Crécy-Lagard; P Schimmel; P Marlière
Journal:  Science       Date:  2001-04-20       Impact factor: 47.728

2.  In vitro selection of ribozymes dependent on peptides for activity.

Authors:  Michael P Robertson; Scott M Knudsen; Andrew D Ellington
Journal:  RNA       Date:  2004-01       Impact factor: 4.942

3.  The evolution of a universal genetic code.

Authors:  J T Wong
Journal:  Proc Natl Acad Sci U S A       Date:  1976-07       Impact factor: 11.205

Review 4.  Coevolution theory of the genetic code at age thirty.

Authors:  J Tze-Fei Wong
Journal:  Bioessays       Date:  2005-04       Impact factor: 4.345

Review 5.  Adding amino acids to the genetic repertoire.

Authors:  Jianming Xie; Peter G Schultz
Journal:  Curr Opin Chem Biol       Date:  2005-11-02       Impact factor: 8.822

6.  Evolving new genetic codes.

Authors:  Jamie M Bacher; Randall A Hughes; J Tze-Fei Wong; Andrew D Ellington
Journal:  Trends Ecol Evol       Date:  2004-02       Impact factor: 17.712

7.  RNA-dependent conversion of phosphoserine forms selenocysteine in eukaryotes and archaea.

Authors:  Jing Yuan; Sotiria Palioura; Juan Carlos Salazar; Dan Su; Patrick O'Donoghue; Michael J Hohn; Alexander Machado Cardoso; William B Whitman; Dieter Söll
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-01       Impact factor: 11.205

8.  Inadequacy of prebiotic synthesis as origin of proteinous amino acids.

Authors:  J T Wong; P M Bronskill
Journal:  J Mol Evol       Date:  1979-07-18       Impact factor: 2.395

9.  The evolutionary history of Cys-tRNACys formation.

Authors:  Patrick O'Donoghue; Anurag Sethi; Carl R Woese; Zaida A Luthey-Schulten
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-27       Impact factor: 11.205

10.  Evolutionary relationship between Halobacterium cutirubrum and eukaryotes determined by use of aminoacyl-tRNA synthetases as phylogenetic probes.

Authors:  Y Kwok; J T Wong
Journal:  Can J Biochem       Date:  1980-03
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  11 in total

1.  A realistic model under which the genetic code is optimal.

Authors:  Harry Buhrman; Peter T S van der Gulik; Gunnar W Klau; Christian Schaffner; Dave Speijer; Leen Stougie
Journal:  J Mol Evol       Date:  2013-07-23       Impact factor: 2.395

Review 2.  Optimization models and the structure of the genetic code.

Authors:  J L Jestin; A Kempf
Journal:  J Mol Evol       Date:  2009-10-20       Impact factor: 2.395

3.  Genetic code mutations: the breaking of a three billion year invariance.

Authors:  Wai-Kin Mat; Hong Xue; J Tze-Fei Wong
Journal:  PLoS One       Date:  2010-08-20       Impact factor: 3.240

Review 4.  Origin and evolution of the genetic code: the universal enigma.

Authors:  Eugene V Koonin; Artem S Novozhilov
Journal:  IUBMB Life       Date:  2009-02       Impact factor: 3.885

5.  The scenario on the origin of translation in the RNA world: in principle of replication parsimony.

Authors:  Wentao Ma
Journal:  Biol Direct       Date:  2010-11-27       Impact factor: 4.540

Review 6.  How amino acids and peptides shaped the RNA world.

Authors:  Peter T S van der Gulik; Dave Speijer
Journal:  Life (Basel)       Date:  2015-01-19

Review 7.  Future of the Genetic Code.

Authors:  Hong Xue; J Tze-Fei Wong
Journal:  Life (Basel)       Date:  2017-02-28

8.  Exceptional error minimization in putative primordial genetic codes.

Authors:  Artem S Novozhilov; Eugene V Koonin
Journal:  Biol Direct       Date:  2009-11-19       Impact factor: 4.540

Review 9.  The capabilities of chaos and complexity.

Authors:  David L Abel
Journal:  Int J Mol Sci       Date:  2009-01-09       Impact factor: 6.208

10.  Coevolution Theory of the Genetic Code at Age Forty: Pathway to Translation and Synthetic Life.

Authors:  J Tze-Fei Wong; Siu-Kin Ng; Wai-Kin Mat; Taobo Hu; Hong Xue
Journal:  Life (Basel)       Date:  2016-03-16
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