Literature DB >> 17604289

Evidence for an influence of chemokine ligand 3-like 1 (CCL3L1) gene copy number on susceptibility to rheumatoid arthritis.

C McKinney1, M E Merriman, P T Chapman, P J Gow, A A Harrison, J Highton, P B B Jones, L McLean, J L O'Donnell, V Pokorny, M Spellerberg, L K Stamp, J Willis, S Steer, T R Merriman.   

Abstract

OBJECTIVE: There is increasing evidence that gene copy-number variation influences phenotypic variation. Chemokine ligand 3-like 1 (CCL3L1) is encoded by a variable copy-number gene, and binds to several pro-inflammatory cytokine receptors, including chemokine receptor 5 (CCR5). Considering lymphocyte recruitment by beta-chemokines is a feature of autoimmunity, and that the CCR5Delta32 variant is associated with protection to rheumatoid arthritis (RA), we hypothesised that CCL3L1 copy-number influences susceptibility to RA and type 1 diabetes (T1D).
METHODS: We measured CCL3L1 copy-number in 1136 RA cases from New Zealand (NZ) and the UK, 252 NZ T1D cases and a total of 1470 controls. All subjects were ancestrally Caucasian.
RESULTS: A copy-number higher than 2 (the most common copy number) was a risk factor for RA in the NZ cohort (odds ratio (OR) 1.34, 95% CI 1.08-1.66, p = 0.009) but not the smaller UK RA cohort (OR 1.09, 95% CI 0.75-1.60, p = 0.643). There was evidence for association in the T1D cohort (OR 1.46, 95% CI 0.98-2.20, p = 0.064) and in the combined RA/T1D cohort (OR 1.30, 95% CI 1.00-1.54, p = 0.003). Genetic interaction between CCL3L1 dosage and CCR5 genotype was found; the increased genetic risk conferred by higher CCL3L1 copy-number was ablated by a dysfunctional CCR5 (CCR5Delta32).
CONCLUSIONS: These data suggest that increased CCL3L1 expression may enhance inflammatory responses and increase the chance of autoimmune disease. Genetic interaction data were consistent with a biologically plausible model; CCR5Delta32 protects against RA and T1D by blocking signalling through the CCR5 pathway, mitigating the pro-inflammatory effects of excess CCL3L1.

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Year:  2007        PMID: 17604289     DOI: 10.1136/ard.2007.075028

Source DB:  PubMed          Journal:  Ann Rheum Dis        ISSN: 0003-4967            Impact factor:   19.103


  68 in total

1.  Measurement methods and accuracy in copy number variation: failure to replicate associations of beta-defensin copy number with Crohn's disease.

Authors:  Marian C Aldhous; Suhaili Abu Bakar; Natalie J Prescott; Raquel Palla; Kimberley Soo; John C Mansfield; Christopher G Mathew; Jack Satsangi; John A L Armour
Journal:  Hum Mol Genet       Date:  2010-09-21       Impact factor: 6.150

2.  Analysis of immune regulatory genes' copy number variants in Graves' disease.

Authors:  Amanda K Huber; Erlinda S Concepcion; Alisha Gandhi; Francesca Menconi; Eric P Smith; Mehdi Keddache; Yaron Tomer
Journal:  Thyroid       Date:  2010-11-08       Impact factor: 6.568

3.  A multilevel model to address batch effects in copy number estimation using SNP arrays.

Authors:  Robert B Scharpf; Ingo Ruczinski; Benilton Carvalho; Betty Doan; Aravinda Chakravarti; Rafael A Irizarry
Journal:  Biostatistics       Date:  2010-07-12       Impact factor: 5.899

4.  Variation in CCL3L1 copy number in rhesus macaques (Macaca mulatta).

Authors:  Patrick L Taormina; Jessica A Satkoski Trask; David G Smith; Sreetharan Kanthaswamy
Journal:  Comp Med       Date:  2012-06       Impact factor: 0.982

5.  Homozygous deletion of the UGT2B17 gene is not associated with osteoporosis risk in elderly Caucasian women.

Authors:  S Chew; B H Mullin; J R Lewis; T D Spector; R L Prince; S G Wilson
Journal:  Osteoporos Int       Date:  2010-09-29       Impact factor: 4.507

6.  Investigation of copy-number variations of C8orf4 in hematological malignancies.

Authors:  Jiahao Zhang; Yan Gao; Xiaosu Zhao; Ming Guan; Wei Zhang; Jun Wan; Bo Yu
Journal:  Med Oncol       Date:  2010-09-29       Impact factor: 3.064

Review 7.  Rheumatoid arthritis: a view of the current genetic landscape.

Authors:  M J H Coenen; P K Gregersen
Journal:  Genes Immun       Date:  2008-11-06       Impact factor: 2.676

Review 8.  Genetic association analysis of copy-number variation (CNV) in human disease pathogenesis.

Authors:  Iuliana Ionita-Laza; Angela J Rogers; Christoph Lange; Benjamin A Raby; Charles Lee
Journal:  Genomics       Date:  2008-10-19       Impact factor: 5.736

Review 9.  The contribution of genetic variation and infection to the pathogenesis of ANCA-associated systemic vasculitis.

Authors:  Lisa C Willcocks; Paul A Lyons; Andrew J Rees; Kenneth G C Smith
Journal:  Arthritis Res Ther       Date:  2010-02-15       Impact factor: 5.156

10.  Negative association of the chemokine receptor CCR5 d32 polymorphism with systemic inflammatory response, extra-articular symptoms and joint erosion in rheumatoid arthritis.

Authors:  Manuela Rossol; Matthias Pierer; Sybille Arnold; Gernot Keysser; Harald Burkhardt; Christoph Baerwald; Ulf Wagner
Journal:  Arthritis Res Ther       Date:  2009-06-18       Impact factor: 5.156

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