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Literature DB >> 22776055

Variation in CCL3L1 copy number in rhesus macaques (Macaca mulatta).

Patrick L Taormina¹, Jessica A Satkoski Trask, David G Smith, Sreetharan Kanthaswamy.

Abstract

We used real-time quantitative PCR (qPCR) methodology to examine copy number variation (CNV) of the CCL3L1 gene among pure Indian-origin, pure Chinese-origin, and hybrid Indian-Chinese rhesus macaques (Macaca mulatta). CNV among purebred macaques fell within expected ranges, with Indian macaques having lower copy numbers than those of Chinese macaques. Compared with the purebred macaques, Indian-Chinese hybrid rhesus macaques showed much greater variance in copy number and an intermediate average copy number. Copy numbers of CCL3L1 in rhesus macaque trios (sire, dam, and offspring) were consistent with Mendelian inheritance.

Entities: Gene Species

Mesh：

Substances：

Year: 2012 PMID： 22776055 PMCID： PMC3364972

Source DB: PubMed Journal: Comp Med ISSN： 1532-0820 Impact factor: 0.982

39 in total

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Authors: Lars Feuk; Andrew R Carson; Stephen W Scherer
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2. Assignment of the STAT6 gene (STAT6) to human chromosome band 12q13 by in situ hybridization.

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Journal: Cytogenet Cell Genet Date: 1997

3. LD78beta, a non-allelic variant of human MIP-1alpha (LD78alpha), has enhanced receptor interactions and potent HIV suppressive activity.

Authors: R J Nibbs; J Yang; N R Landau; J H Mao; G J Graham
Journal: J Biol Chem Date: 1999-06-18 Impact factor: 5.157

4. The influence of CCL3L1 gene-containing segmental duplications on HIV-1/AIDS susceptibility.

Authors: Enrique Gonzalez; Hemant Kulkarni; Hector Bolivar; Andrea Mangano; Racquel Sanchez; Gabriel Catano; Robert J Nibbs; Barry I Freedman; Marlon P Quinones; Michael J Bamshad; Krishna K Murthy; Brad H Rovin; William Bradley; Robert A Clark; Stephanie A Anderson; Robert J O'connell; Brian K Agan; Seema S Ahuja; Rosa Bologna; Luisa Sen; Matthew J Dolan; Sunil K Ahuja
Journal: Science Date: 2005-01-06 Impact factor: 47.728

Variation in CCL3L1 copy number in rhesus macaques (Macaca mulatta).

Review 1. Structural variation in the human genome.

2. Assignment of the STAT6 gene (STAT6) to human chromosome band 12q13 by in situ hybridization.

3. LD78beta, a non-allelic variant of human MIP-1alpha (LD78alpha), has enhanced receptor interactions and potent HIV suppressive activity.

4. The influence of CCL3L1 gene-containing segmental duplications on HIV-1/AIDS susceptibility.

5. Complex haplotypes, copy number polymorphisms and coding variation in two recently divergent mouse strains.

6. Genomic segmental polymorphisms in inbred mouse strains.

7. An interleukin-4-induced transcription factor: IL-4 Stat.

8. Intra- and interspecific variation of the CCR5 gene in higher primates.

9. Transcription factor PRDII-BF1 activates human immunodeficiency virus type 1 gene expression.

10. A single amino acid change in the SPRY domain of human Trim5alpha leads to HIV-1 restriction.

1. Identifying human-rhesus macaque gene orthologs using heterospecific SNP probes.