Literature DB >> 17601130

Biogeochemical consequences of rapid microbial turnover and seasonal succession in soil.

S K Schmidt1, E K Costello, D R Nemergut, C C Cleveland, S C Reed, M N Weintraub, A F Meyer, A M Martin.   

Abstract

Soil microbial communities have the metabolic and genetic capability to adapt to changing environmental conditions on very short time scales. In this paper we combine biogeochemical and molecular approaches to reveal this potential, showing that microbial biomass can turn over on time scales of days to months in soil, resulting in a succession of microbial communities over the course of a year. This new understanding of the year-round turnover and succession of microbial communities allows us for the first time to propose a temporally explicit N cycle that provides mechanistic hypotheses to explain both the loss and retention of dissolved organic N (DON) and inorganic N (DIN) throughout the year in terrestrial ecosystems. In addition, our results strongly support the hypothesis that turnover of the microbial community is the largest source of DON and DIN for plant uptake during the plant growing season. While this model of microbial biogeochemistry is derived from observed dynamics in the alpine, we present several examples from other ecosystems to indicate that the general ideas of biogeochemical fluxes being linked to turnover and succession of microbial communities are applicable to a wide range of terrestrial ecosystems.

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Year:  2007        PMID: 17601130     DOI: 10.1890/06-0164

Source DB:  PubMed          Journal:  Ecology        ISSN: 0012-9658            Impact factor:   5.499


  45 in total

1.  Identification of nitrogen-incorporating bacteria in petroleum-contaminated arctic soils by using [15N]DNA-based stable isotope probing and pyrosequencing.

Authors:  Terrence H Bell; Etienne Yergeau; Christine Martineau; David Juck; Lyle G Whyte; Charles W Greer
Journal:  Appl Environ Microbiol       Date:  2011-04-15       Impact factor: 4.792

2.  Efficiencies of different microbial parameters as indicator to assess slight metal pollutions in a farm field near a gold mining area.

Authors:  Qiang Wang; Jiulan Dai; Yue Yu; Yongli Zhang; Tianlin Shen; Jiangsheng Liu; Renqing Wang
Journal:  Environ Monit Assess       Date:  2009-02-24       Impact factor: 2.513

Review 3.  Patterns and processes of microbial community assembly.

Authors:  Diana R Nemergut; Steven K Schmidt; Tadashi Fukami; Sean P O'Neill; Teresa M Bilinski; Lee F Stanish; Joseph E Knelman; John L Darcy; Ryan C Lynch; Phillip Wickey; Scott Ferrenberg
Journal:  Microbiol Mol Biol Rev       Date:  2013-09       Impact factor: 11.056

4.  Plant communities, soil carbon, and soil nitrogen properties in a successional gradient of sub-alpine meadows on the eastern Tibetan plateau of China.

Authors:  Wen-Jin Li; Jin-Hua Li; Johannes M H Knops; Gang Wang; Ju-Jie Jia; Yan-Yan Qin
Journal:  Environ Manage       Date:  2009-08-25       Impact factor: 3.266

5.  Phylogeny and ecophysiology of opportunistic "snow molds" from a subalpine forest ecosystem.

Authors:  S K Schmidt; K L Wilson; A F Meyer; M M Gebauer; A J King
Journal:  Microb Ecol       Date:  2008-04-29       Impact factor: 4.552

6.  Microbial activity and diversity during extreme freeze-thaw cycles in periglacial soils, 5400 m elevation, Cordillera Vilcanota, Perú.

Authors:  S K Schmidt; D R Nemergut; A E Miller; K R Freeman; A J King; A Seimon
Journal:  Extremophiles       Date:  2009-07-12       Impact factor: 2.395

7.  Structure of bacterial and eukaryote communities reflect in situ controls on community assembly in a high-alpine lake.

Authors:  Eli Michael S Gendron; John L Darcy; Katherinia Hell; Steven K Schmidt
Journal:  J Microbiol       Date:  2019-08-03       Impact factor: 3.422

8.  Ligninolytic Activity at 0 °C of Fungi on Oak Leaves Under Snow Cover in a Mixed Forest in Japan.

Authors:  Toshizumi Miyamoto; Keiichi Koda; Arata Kawaguchi; Yasumitsu Uraki
Journal:  Microb Ecol       Date:  2017-02-28       Impact factor: 4.552

9.  Linking the development and functioning of a carnivorous pitcher plant's microbial digestive community.

Authors:  David W Armitage
Journal:  ISME J       Date:  2017-06-23       Impact factor: 10.302

10.  The extent and pathways of nitrogen loss in turfgrass systems: Age impacts.

Authors:  Huaihai Chen; Tianyou Yang; Qing Xia; Daniel Bowman; David Williams; John T Walker; Wei Shi
Journal:  Sci Total Environ       Date:  2018-05-11       Impact factor: 7.963

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