Literature DB >> 17599416

DNA repair glycosylases with a [4Fe-4S] cluster: a redox cofactor for DNA-mediated charge transport?

Amie K Boal1, Eylon Yavin, Jacqueline K Barton.   

Abstract

The [4Fe-4S] cluster is ubiquitous to a class of base excision repair enzymes in organisms ranging from bacteria to man and was first considered as a structural element, owing to its redox stability under physiological conditions. When studied bound to DNA, two of these repair proteins (MutY and Endonuclease III from Escherichia coli) display DNA-dependent reversible electron transfer with characteristics typical of high potential iron proteins. These results have inspired a reexamination of the role of the [4Fe-4S] cluster in this class of enzymes. Might the [4Fe-4S] cluster be used as a redox cofactor to search for damaged sites using DNA-mediated charge transport, a process well known to be highly sensitive to lesions and mismatched bases? Described here are experiments demonstrating the utility of DNA-mediated charge transport in characterizing these DNA-binding metalloproteins, as well as efforts to elucidate this new function for DNA as an electronic signaling medium among the proteins.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17599416      PMCID: PMC2094209          DOI: 10.1016/j.jinorgbio.2007.05.001

Source DB:  PubMed          Journal:  J Inorg Biochem        ISSN: 0162-0134            Impact factor:   4.155


  68 in total

1.  Single-base mismatch detection based on charge transduction through DNA.

Authors:  S O Kelley; E M Boon; J K Barton; N M Jackson; M G Hill
Journal:  Nucleic Acids Res       Date:  1999-12-15       Impact factor: 16.971

Review 2.  Long-range charge transfer in DNA: transient structural distortions control the distance dependence.

Authors:  G B Schuster
Journal:  Acc Chem Res       Date:  2000-04       Impact factor: 22.384

3.  Oxidative charge transport through DNA in nucleosome core particles.

Authors:  Megan E Núñez; Katherine T Noyes; Jacqueline K Barton
Journal:  Chem Biol       Date:  2002-04

Review 4.  The GO system protects organisms from the mutagenic effect of the spontaneous lesion 8-hydroxyguanine (7,8-dihydro-8-oxoguanine).

Authors:  M L Michaels; J H Miller
Journal:  J Bacteriol       Date:  1992-10       Impact factor: 3.490

5.  Physical constraints and functional characteristics of transcription factor-DNA interaction.

Authors:  Ulrich Gerland; J David Moroz; Terence Hwa
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-06       Impact factor: 11.205

6.  Site-directed mutagenesis of the cysteine ligands to the [4Fe-4S] cluster of Escherichia coli MutY.

Authors:  M P Golinelli; N H Chmiel; S S David
Journal:  Biochemistry       Date:  1999-06-01       Impact factor: 3.162

Review 7.  Repair of oxidative damage to DNA: enzymology and biology.

Authors:  B Demple; L Harrison
Journal:  Annu Rev Biochem       Date:  1994       Impact factor: 23.643

8.  Inherited variants of MYH associated with somatic G:C-->T:A mutations in colorectal tumors.

Authors:  Nada Al-Tassan; Nikolas H Chmiel; Julie Maynard; Nick Fleming; Alison L Livingston; Geraint T Williams; Angela K Hodges; D Rhodri Davies; Sheila S David; Julian R Sampson; Jeremy P Cheadle
Journal:  Nat Genet       Date:  2002-01-30       Impact factor: 38.330

9.  Increased base change mutations at G:C pairs in Escherichia coli deficient in endonuclease III and VIII.

Authors:  K Tano; Y Iwamatsu; S Yasuhira; H Utsumi; K Takimoto
Journal:  J Radiat Res       Date:  2001-12       Impact factor: 2.724

10.  MutY repair is mutagenic in mutT- strains of Escherichia coli.

Authors:  J J Vidmar; C G Cupples
Journal:  Can J Microbiol       Date:  1993-09       Impact factor: 2.419

View more
  22 in total

Review 1.  Cytosolic iron-sulfur cluster assembly (CIA) system: factors, mechanism, and relevance to cellular iron regulation.

Authors:  Anil K Sharma; Leif J Pallesen; Robert J Spang; William E Walden
Journal:  J Biol Chem       Date:  2010-06-03       Impact factor: 5.157

Review 2.  Repair of 8-oxoG:A mismatches by the MUTYH glycosylase: Mechanism, metals and medicine.

Authors:  Douglas M Banda; Nicole N Nuñez; Michael A Burnside; Katie M Bradshaw; Sheila S David
Journal:  Free Radic Biol Med       Date:  2017-01-10       Impact factor: 7.376

3.  Sulfur K-Edge XAS Studies of the Effect of DNA Binding on the [Fe4S4] Site in EndoIII and MutY.

Authors:  Yang Ha; Anna R Arnold; Nicole N Nuñez; Phillip L Bartels; Andy Zhou; Sheila S David; Jacqueline K Barton; Britt Hedman; Keith O Hodgson; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2017-08-10       Impact factor: 15.419

4.  The self-organizing fractal theory as a universal discovery method: the phenomenon of life.

Authors:  Alexei Kurakin
Journal:  Theor Biol Med Model       Date:  2011-03-29       Impact factor: 2.432

Review 5.  Mechanisms for DNA charge transport.

Authors:  Joseph C Genereux; Jacqueline K Barton
Journal:  Chem Rev       Date:  2010-03-10       Impact factor: 60.622

6.  The Oxidation State of [4Fe4S] Clusters Modulates the DNA-Binding Affinity of DNA Repair Proteins.

Authors:  Edmund C M Tse; Theodore J Zwang; Jacqueline K Barton
Journal:  J Am Chem Soc       Date:  2017-08-29       Impact factor: 15.419

7.  Acute loss of iron-sulfur clusters results in metabolic reprogramming and generation of lipid droplets in mammalian cells.

Authors:  Daniel R Crooks; Nunziata Maio; Andrew N Lane; Michal Jarnik; Richard M Higashi; Ronald G Haller; Ye Yang; Teresa W-M Fan; W Marston Linehan; Tracey A Rouault
Journal:  J Biol Chem       Date:  2018-03-09       Impact factor: 5.157

8.  Theoretical study of DNA damage recognition via electron transfer from the [4Fe-4S] complex of MutY.

Authors:  Jong-Chin Lin; Rajiv R P Singh; Daniel L Cox
Journal:  Biophys J       Date:  2008-07-03       Impact factor: 4.033

9.  Redox Control of the Human Iron-Sulfur Repair Protein MitoNEET Activity via Its Iron-Sulfur Cluster.

Authors:  Marie-Pierre Golinelli-Cohen; Ewen Lescop; Cécile Mons; Sergio Gonçalves; Martin Clémancey; Jérôme Santolini; Eric Guittet; Geneviève Blondin; Jean-Marc Latour; Cécile Bouton
Journal:  J Biol Chem       Date:  2016-02-17       Impact factor: 5.157

10.  Base excision repair and the role of MUTYH.

Authors:  Carla Kairupan; Rodney J Scott
Journal:  Hered Cancer Clin Pract       Date:  2007-12-15       Impact factor: 2.857

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.