Literature DB >> 17595167

Poly(A) nuclease interacts with the C-terminal domain of polyadenylate-binding protein domain from poly(A)-binding protein.

Nadeem Siddiqui1, David A Mangus, Tsung-Cheng Chang, Jeanne-Marie Palermino, Ann-Bin Shyu, Kalle Gehring.   

Abstract

The poly(A)-binding protein (PABP) is an essential protein found in all eukaryotes and is involved in an extensive range of cellular functions, including translation, mRNA metabolism, and mRNA export. Its C-terminal region contains a peptide-interacting PABC domain that recruits proteins containing a highly specific PAM-2 sequence motif to the messenger ribonucleoprotein complex. In humans, these proteins, including Paip1, Paip2, eRF3 (eukaryotic release factor 3), Ataxin-2, and Tob2, are all found to regulate translation through varying mechanisms. The following reports poly(A) nuclease (PAN) as a PABC-interacting partner in both yeast and humans. Their interaction is mediated by a PAM-2 motif identified within the PAN3 subunit. This site was identified in various fungal and animal species suggesting that the interaction is conserved throughout evolution. Our results indicate that PABP is directly involved in recruiting a deadenylase to the messenger ribonucleoprotein complex. This demonstrates a novel role for the PABC domain in mRNA metabolic processes and gives further insight into the function of PABP in mRNA maturation, export, and turnover.

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Year:  2007        PMID: 17595167     DOI: 10.1074/jbc.M701256200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  46 in total

1.  miRNA-mediated deadenylation is orchestrated by GW182 through two conserved motifs that interact with CCR4-NOT.

Authors:  Marc R Fabian; Maja K Cieplak; Filipp Frank; Masahiro Morita; Jonathan Green; Tharan Srikumar; Bhushan Nagar; Tadashi Yamamoto; Brian Raught; Thomas F Duchaine; Nahum Sonenberg
Journal:  Nat Struct Mol Biol       Date:  2011-10-07       Impact factor: 15.369

2.  Nuclear import of cytoplasmic poly(A) binding protein restricts gene expression via hyperadenylation and nuclear retention of mRNA.

Authors:  G Renuka Kumar; Britt A Glaunsinger
Journal:  Mol Cell Biol       Date:  2010-09-07       Impact factor: 4.272

3.  Mechanism of mRNA deadenylation: evidence for a molecular interplay between translation termination factor eRF3 and mRNA deadenylases.

Authors:  Yuji Funakoshi; Yusuke Doi; Nao Hosoda; Naoyuki Uchida; Masanori Osawa; Ichio Shimada; Masafumi Tsujimoto; Tsutomu Suzuki; Toshiaki Katada; Shin-ichi Hoshino
Journal:  Genes Dev       Date:  2007-12-01       Impact factor: 11.361

4.  Biological role of the two overlapping poly(A)-binding protein interacting motifs 2 (PAM2) of eukaryotic releasing factor eRF3 in mRNA decay.

Authors:  Masanori Osawa; Nao Hosoda; Tamiji Nakanishi; Naoyuki Uchida; Tomomi Kimura; Shunsuke Imai; Asako Machiyama; Toshiaki Katada; Shin-ichi Hoshino; Ichio Shimada
Journal:  RNA       Date:  2012-09-27       Impact factor: 4.942

5.  Unraveling regulation and new components of human P-bodies through a protein interaction framework and experimental validation.

Authors:  Dinghai Zheng; Chyi-Ying A Chen; Ann-Bin Shyu
Journal:  RNA       Date:  2011-07-12       Impact factor: 4.942

Review 6.  Towards a molecular understanding of microRNA-mediated gene silencing.

Authors:  Stefanie Jonas; Elisa Izaurralde
Journal:  Nat Rev Genet       Date:  2015-06-16       Impact factor: 53.242

7.  Functional characterization of three leishmania poly(a) binding protein homologues with distinct binding properties to RNA and protein partners.

Authors:  Tamara D da Costa Lima; Danielle M N Moura; Christian R S Reis; J Ronnie C Vasconcelos; Louise Ellis; Mark Carrington; Regina C B Q Figueiredo; Osvaldo P de Melo Neto
Journal:  Eukaryot Cell       Date:  2010-07-30

Review 8.  A molecular link between miRISCs and deadenylases provides new insight into the mechanism of gene silencing by microRNAs.

Authors:  Joerg E Braun; Eric Huntzinger; Elisa Izaurralde
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-12-01       Impact factor: 10.005

9.  The role of deadenylation in the degradation of unstable mRNAs in trypanosomes.

Authors:  Angela Schwede; Theresa Manful; Bhaskar Anand Jha; Claudia Helbig; Natalia Bercovich; Mhairi Stewart; Christine Clayton
Journal:  Nucleic Acids Res       Date:  2009-07-13       Impact factor: 16.971

10.  Molecular basis of eRF3 recognition by the MLLE domain of poly(A)-binding protein.

Authors:  Guennadi Kozlov; Kalle Gehring
Journal:  PLoS One       Date:  2010-04-14       Impact factor: 3.240

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