Literature DB >> 17567794

Detection of four Plasmodium species by genus- and species-specific loop-mediated isothermal amplification for clinical diagnosis.

Eun-Taek Han1, Risa Watanabe, Jetsumon Sattabongkot, Benjawan Khuntirat, Jeeraphat Sirichaisinthop, Hideyuki Iriko, Ling Jin, Satoru Takeo, Takafumi Tsuboi.   

Abstract

Loop-mediated isothermal amplification (LAMP), a novel nucleic acid amplification method, was developed for the clinical detection of four species of human malaria parasites: Plasmodium falciparum, P. vivax, P. malariae, and P. ovale. We evaluated the sensitivity and specificity of LAMP in comparison with the results of microscopic examination and nested PCR. LAMP showed a detection limit (analytical sensitivity) of 10 copies of the target 18S rRNA genes for P. malariae and P. ovale and 100 copies for the genus Plasmodium, P. falciparum, and P. vivax. LAMP detected malaria parasites in 67 of 68 microscopically positive blood samples (sensitivity, 98.5%) and 3 of 53 microscopically negative samples (specificity, 94.3%), in good agreement with the results of nested PCR. The LAMP reactions yielded results within about 26 min, on average, for detection of the genus Plasmodium, 32 min for P. falciparum, 31 min for P. vivax, 35 min for P. malariae, and 36 min for P. ovale. Accordingly, in comparison to the results obtained by microscopy, LAMP had a similar sensitivity and a greater specificity and LAMP yielded results similar to those of nested PCR in a shorter turnaround time. Because it can be performed with a simple technology, i.e., with heat-treated blood as the template, reaction in a water bath, and inspection of the results by the naked eye because of the use of a fluorescent dye, LAMP may provide a simple and reliable test for routine screening for malaria parasites in both clinical laboratories and malaria clinics in areas where malaria is endemic.

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Year:  2007        PMID: 17567794      PMCID: PMC1951264          DOI: 10.1128/JCM.02117-06

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  28 in total

1.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  Detection of loop-mediated isothermal amplification reaction by turbidity derived from magnesium pyrophosphate formation.

Authors:  Y Mori; K Nagamine; N Tomita; T Notomi
Journal:  Biochem Biophys Res Commun       Date:  2001-11-23       Impact factor: 3.575

3.  Loop-mediated isothermal amplification reaction using a nondenatured template.

Authors:  K Nagamine; K Watanabe; K Ohtsuka; T Hase; T Notomi
Journal:  Clin Chem       Date:  2001-09       Impact factor: 8.327

4.  Two types of Plasmodium ovale defined by SSU rRNA have distinct sequences for ookinete surface proteins.

Authors:  Mayumi Tachibana; Takafumi Tsuboi; Osamu Kaneko; Benjawan Khuntirat; Motomi Torii
Journal:  Mol Biochem Parasitol       Date:  2002-07       Impact factor: 1.759

5.  Rapid detection and differentiation of dengue virus serotypes by a real-time reverse transcription-loop-mediated isothermal amplification assay.

Authors:  Manmohan Parida; Kouhei Horioke; Hiroyuki Ishida; Paban Kumar Dash; Parag Saxena; Asha Mukul Jana; Mohammed Alimul Islam; Shingo Inoue; Norimitsu Hosaka; Kouichi Morita
Journal:  J Clin Microbiol       Date:  2005-06       Impact factor: 5.948

6.  Sensitive and inexpensive molecular test for falciparum malaria: detecting Plasmodium falciparum DNA directly from heat-treated blood by loop-mediated isothermal amplification.

Authors:  Leo L M Poon; Bonnie W Y Wong; Edmund H T Ma; Kwok H Chan; Larry M C Chow; Wimal Abeyewickreme; Noppadon Tangpukdee; Kwok Y Yuen; Yi Guan; Sornchai Looareesuwan; J S Malik Peiris
Journal:  Clin Chem       Date:  2005-12-08       Impact factor: 8.327

Review 7.  Rapid diagnostic tests for malaria parasites.

Authors:  Anthony Moody
Journal:  Clin Microbiol Rev       Date:  2002-01       Impact factor: 26.132

Review 8.  How useful is PCR in the diagnosis of malaria?

Authors:  Thomas Hänscheid; Martin P Grobusch
Journal:  Trends Parasitol       Date:  2002-09

9.  A comparison of two rapid field immunochromatographic tests to expert microscopy in the diagnosis of malaria.

Authors:  Daniel Philippe Mason; Fumihiko Kawamoto; Khin Lin; Anintita Laoboonchai; Chansuda Wongsrichanalai
Journal:  Acta Trop       Date:  2002-04       Impact factor: 3.112

10.  Performance of OptiMAL(R) in the diagnosis of Plasmodium vivax and Plasmodium falciparum infections in a malaria referral center in Colombia.

Authors:  Beatriz E Ferro; Iveth J Gonzalez; Fanny de Carvajal; Gloria I Palma; Nancy G Saravia
Journal:  Mem Inst Oswaldo Cruz       Date:  2002-07       Impact factor: 2.743

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  129 in total

1.  Diagnosis of gestational, congenital, and placental malaria in Colombia: comparison of the efficacy of microscopy, nested polymerase chain reaction, and histopathology.

Authors:  Ivón M Campos; Mary L Uribe; Carolina Cuesta; Alexander Franco-Gallego; Jaime Carmona-Fonseca; Amanda Maestre
Journal:  Am J Trop Med Hyg       Date:  2011-06       Impact factor: 2.345

2.  Real-time quantitative reverse transcription PCR for monitoring of blood-stage Plasmodium falciparum infections in malaria human challenge trials.

Authors:  Sean C Murphy; Jennifer L Prentice; Kathryn Williamson; Carolyn K Wallis; Ferric C Fang; Michal Fried; Cris Pinzon; Ruobing Wang; Angela K Talley; Stefan H I Kappe; Patrick E Duffy; Brad T Cookson
Journal:  Am J Trop Med Hyg       Date:  2012-03       Impact factor: 2.345

3.  Infectivity of symptomatic and asymptomatic Plasmodium vivax infections to a Southeast Asian vector, Anopheles dirus.

Authors:  Kirakorn Kiattibutr; Wanlapa Roobsoong; Patchara Sriwichai; Teerawat Saeseu; Nattawan Rachaphaew; Chayanut Suansomjit; Sureemas Buates; Thomas Obadia; Ivo Mueller; Liwang Cui; Wang Nguitragool; Jetsumon Sattabongkot
Journal:  Int J Parasitol       Date:  2016-12-30       Impact factor: 3.981

4.  Development of a reverse transcription-loop-mediated isothermal amplification assay for detection of pandemic (H1N1) 2009 virus as a novel molecular method for diagnosis of pandemic influenza in resource-limited settings.

Authors:  Toru Kubo; Masanobu Agoh; Le Q Mai; Kiyoyasu Fukushima; Hidekazu Nishimura; Akinori Yamaguchi; Manabu Hirano; Akira Yoshikawa; Futoshi Hasebe; Shigeru Kohno; Kouichi Morita
Journal:  J Clin Microbiol       Date:  2010-01-13       Impact factor: 5.948

5.  Real-time reverse-transcription loop-mediated isothermal amplification for rapid detection of rift valley Fever virus.

Authors:  Christophe N Peyrefitte; Laetitia Boubis; Daniel Coudrier; Michèle Bouloy; Marc Grandadam; Hugues J Tolou; Sébastien Plumet
Journal:  J Clin Microbiol       Date:  2008-09-17       Impact factor: 5.948

6.  Development of a reverse transcriptase loop-mediated isothermal amplification (LAMP) assay for the sensitive detection of Leishmania parasites in clinical samples.

Authors:  Emily R Adams; Gerard J Schoone; Al Farazdag Ageed; Sayda El Safi; Henk D F H Schallig
Journal:  Am J Trop Med Hyg       Date:  2010-04       Impact factor: 2.345

7.  Hexaplex PCR detection system for identification of five human Plasmodium species with an internal control.

Authors:  Ching Hoong Chew; Yvonne Ai Lian Lim; Ping Chin Lee; Rohela Mahmud; Kek Heng Chua
Journal:  J Clin Microbiol       Date:  2012-10-03       Impact factor: 5.948

8.  Development of Visually Improved Loop Mediated Isothermal Amplification for the Diagnosis of Plasmodium vivax Malaria in a Tertiary Hospital in Chandigarh, North India.

Authors:  Hargobinder Kaur; Rakesh Sehgal; Devendra Bansal; Ali A Sultan; Ashish Bhalla; Sunit C Singhi
Journal:  Am J Trop Med Hyg       Date:  2018-03-15       Impact factor: 2.345

9.  Evaluation of three PCR-based diagnostic assays for detecting mixed Plasmodium infection.

Authors:  Tonya Mixson-Hayden; Naomi W Lucchi; Venkatachalam Udhayakumar
Journal:  BMC Res Notes       Date:  2010-03-31

10.  Diagnosis of parasitic diseases: old and new approaches.

Authors:  Momar Ndao
Journal:  Interdiscip Perspect Infect Dis       Date:  2009-12-30
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