Literature DB >> 17556099

Beta-synuclein gene variants and Parkinson's disease: a preliminary case-control study.

Laura Brighina1, Njide U Okubadejo, Nicole K Schneider, Timothy G Lesnick, Mariza de Andrade, Julie M Cunningham, Matthew J Farrer, Sarah J Lincoln, Walter A Rocca, Demetrius M Maraganore.   

Abstract

Aggregation and fibrillization of the alpha-synuclein protein, which is the main component of Lewy bodies, may represent important processes in the pathogenesis of Parkinson's disease (PD). Several in vivo and in vitro studies suggest that beta-synuclein may be a natural negative regulator of alpha-synuclein aggregation and fibrillization. The goal of the present study was to investigate the association of two polymorphisms (rs35035889 and rs1352303) in the beta-synuclein (SNCB) gene with PD. Our case-control study included a total of 370 case-unaffected sibling pairs and 168 case-unrelated control pairs (538 pairs total). The subjects were recruited from an ongoing study of the molecular epidemiology of PD in the Upper Midwest (USA). We employed a liberalization of the sibling transmission disequilibrium test to study the main effects of the gene variants for subjects overall and for strata defined by age at study, gender, ethnicity, clinical diagnostic certainty, dementia, and family history of PD (adjusted for age at study and gender as appropriate). The analyses were conducted for each SNCB variant separately, and also for two-locus haplotypes using score tests. Neither of the SNCB SNPs examined were associated with PD overall or in strata, and haplotype analyses were negative as well. However, one of the two SNPs (rs1352303) was associated with a delayed age at onset of PD in women. The results of this preliminary study suggest that the SNCB locus, though not a susceptibility gene for PD, might modify the age at onset of PD.

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Year:  2007        PMID: 17556099      PMCID: PMC1978171          DOI: 10.1016/j.neulet.2007.05.021

Source DB:  PubMed          Journal:  Neurosci Lett        ISSN: 0304-3940            Impact factor:   3.046


  22 in total

1.  No pathogenic mutations in the beta-synuclein gene in Parkinson's disease.

Authors:  S Lincoln; R Crook; M C Chartier-Harlin; K Gwinn-Hardy; M Baker; V Mouroux; F Richard; E Becquet; P Amouyel; A Destée; J Hardy; M Farrer
Journal:  Neurosci Lett       Date:  1999-07-09       Impact factor: 3.046

2.  Score tests for association between traits and haplotypes when linkage phase is ambiguous.

Authors:  Daniel J Schaid; Charles M Rowland; David E Tines; Robert M Jacobson; Gregory A Poland
Journal:  Am J Hum Genet       Date:  2001-12-27       Impact factor: 11.025

3.  The first linkage disequilibrium (LD) maps: delineation of hot and cold blocks by diplotype analysis.

Authors:  N Maniatis; A Collins; C F Xu; L C McCarthy; D R Hewett; W Tapper; S Ennis; X Ke; N E Morton
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-12       Impact factor: 11.205

4.  Reliability of self-reported ancestry among siblings: implications for genetic association studies.

Authors:  Melinda S Burnett; Kari J Strain; Timothy G Lesnick; Mariza de Andrade; Walter A Rocca; Demetrius M Maraganore
Journal:  Am J Epidemiol       Date:  2006-01-18       Impact factor: 4.897

Review 5.  The genetics of health.

Authors:  Joseph H Nadeau; Eric J Topol
Journal:  Nat Genet       Date:  2006-10       Impact factor: 38.330

6.  Effect of allelic variation at the NACP-Rep1 repeat upstream of the alpha-synuclein gene (SNCA) on transcription in a cell culture luciferase reporter system.

Authors:  O Chiba-Falek; R L Nussbaum
Journal:  Hum Mol Genet       Date:  2001-12-15       Impact factor: 6.150

7.  Collaborative analysis of alpha-synuclein gene promoter variability and Parkinson disease.

Authors:  Demetrius M Maraganore; Mariza de Andrade; Alexis Elbaz; Matthew J Farrer; John P Ioannidis; Rejko Krüger; Walter A Rocca; Nicole K Schneider; Timothy G Lesnick; Sarah J Lincoln; Mary M Hulihan; Jan O Aasly; Tetsuo Ashizawa; Marie-Christine Chartier-Harlin; Harvey Checkoway; Carlo Ferrarese; Georgios Hadjigeorgiou; Nobutaka Hattori; Hideshi Kawakami; Jean-Charles Lambert; Timothy Lynch; George D Mellick; Spiridon Papapetropoulos; Abbas Parsian; Aldo Quattrone; Olaf Riess; Eng-King Tan; Christine Van Broeckhoven
Journal:  JAMA       Date:  2006-08-09       Impact factor: 56.272

8.  beta-Synuclein inhibits alpha-synuclein aggregation: a possible role as an anti-parkinsonian factor.

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Journal:  Neuron       Date:  2001-10-25       Impact factor: 17.173

9.  Joint analysis of the NACP-REP1 marker within the alpha synuclein gene concludes association with alcohol dependence.

Authors:  D Bönsch; T Lederer; U Reulbach; T Hothorn; J Kornhuber; S Bleich
Journal:  Hum Mol Genet       Date:  2005-02-24       Impact factor: 6.150

10.  Genome-wide genotyping in Parkinson's disease and neurologically normal controls: first stage analysis and public release of data.

Authors:  Hon-Chung Fung; Sonja Scholz; Mar Matarin; Javier Simón-Sánchez; Dena Hernandez; Angela Britton; J Raphael Gibbs; Carl Langefeld; Matt L Stiegert; Jennifer Schymick; Michael S Okun; Ronald J Mandel; Hubert H Fernandez; Kelly D Foote; Ramón L Rodríguez; Elizabeth Peckham; Fabienne Wavrant De Vrieze; Katrina Gwinn-Hardy; John A Hardy; Andrew Singleton
Journal:  Lancet Neurol       Date:  2006-11       Impact factor: 44.182

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  11 in total

1.  Common variants in PARK loci and related genes and Parkinson's disease.

Authors:  Sun Ju Chung; Sebastian M Armasu; Joanna M Biernacka; Timothy G Lesnick; David N Rider; Sarah J Lincoln; Alexandra I Ortolaza; Matthew J Farrer; Julie M Cunningham; Walter A Rocca; Demetrius M Maraganore
Journal:  Mov Disord       Date:  2010-12-13       Impact factor: 10.338

Review 2.  Genetics of synucleins in neurodegenerative diseases.

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Journal:  Acta Neuropathol       Date:  2020-08-01       Impact factor: 17.088

3.  Association of alpha-, beta-, and gamma-Synuclein with diffuse lewy body disease.

Authors:  Kenya Nishioka; Christian Wider; Carles Vilariño-Güell; Alexandra I Soto-Ortolaza; Sarah J Lincoln; Jennifer M Kachergus; Barbara Jasinska-Myga; Owen A Ross; Alex Rajput; Christopher A Robinson; Tanis J Ferman; Zbigniew K Wszolek; Dennis W Dickson; Matthew J Farrer
Journal:  Arch Neurol       Date:  2010-08

4.  Residual structure, backbone dynamics, and interactions within the synuclein family.

Authors:  Yoon-Hui Sung; David Eliezer
Journal:  J Mol Biol       Date:  2007-07-17       Impact factor: 5.469

5.  Prioritizing disease genes with an improved dual label propagation framework.

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Review 6.  Epigenetics in Lewy Body Diseases: Impact on Gene Expression, Utility as a Biomarker, and Possibilities for Therapy.

Authors:  Aintzane Urbizu; Katrin Beyer
Journal:  Int J Mol Sci       Date:  2020-07-02       Impact factor: 5.923

Review 7.  Possible alterations in β-Synuclein, the non-amyloidogenic homologue of α-Synuclein, during progression of sporadic α-synucleinopathies.

Authors:  Masayo Fujita; Akio Sekigawa; Kazunari Sekiyama; Yoshiki Takamatsu; Makoto Hashimoto
Journal:  Int J Mol Sci       Date:  2012-09-14       Impact factor: 6.208

8.  Interactogeneous: disease gene prioritization using heterogeneous networks and full topology scores.

Authors:  Joana P Gonçalves; Alexandre P Francisco; Yves Moreau; Sara C Madeira
Journal:  PLoS One       Date:  2012-11-19       Impact factor: 3.240

9.  Did α-Synuclein and Glucocerebrosidase Coevolve? Implications for Parkinson's Disease.

Authors:  James M Gruschus
Journal:  PLoS One       Date:  2015-07-27       Impact factor: 3.240

10.  Systematic Surveys of Iron Homeostasis Mechanisms Reveal Ferritin Superfamily and Nucleotide Surveillance Regulation to be Modified by PINK1 Absence.

Authors:  Jana Key; Nesli Ece Sen; Aleksandar Arsović; Stella Krämer; Robert Hülse; Natasha Nadeem Khan; David Meierhofer; Suzana Gispert; Gabriele Koepf; Georg Auburger
Journal:  Cells       Date:  2020-10-02       Impact factor: 6.600

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