Literature DB >> 16421243

Reliability of self-reported ancestry among siblings: implications for genetic association studies.

Melinda S Burnett1, Kari J Strain, Timothy G Lesnick, Mariza de Andrade, Walter A Rocca, Demetrius M Maraganore.   

Abstract

This study investigated the reliability of self-reported ancestry by comparing the interview responses of probands and their siblings. A total of 546 sibling pairs were ascertained in a family-based study of susceptibility genes for Parkinson's disease and asked to identify maternal and paternal countries of origin. Probands were recruited prospectively from the Department of Neurology of the Mayo Clinic in Rochester, Minnesota, from June 1, 1996, through May 31, 2005. Probands resided within Minnesota or one of the four surrounding states (Wisconsin, Iowa, South Dakota, North Dakota). Only 49 percent of these sibling pairs, primarily Caucasian, agreed completely on the countries of origin of both parents. The agreement increased to 68 percent when named countries were postcoded into six population genetic clusters (as previously defined by microsatellite markers). Self-reported ancestry may not be a reliable method to reduce the possible impact of population stratification in genetic association studies of outbred populations, such as in the United States.

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Mesh:

Year:  2006        PMID: 16421243     DOI: 10.1093/aje/kwj057

Source DB:  PubMed          Journal:  Am J Epidemiol        ISSN: 0002-9262            Impact factor:   4.897


  17 in total

Review 1.  Review and evaluation of methods correcting for population stratification with a focus on underlying statistical principles.

Authors:  Hemant K Tiwari; Jill Barnholtz-Sloan; Nathan Wineinger; Miguel A Padilla; Laura K Vaughan; David B Allison
Journal:  Hum Hered       Date:  2008-03-31       Impact factor: 0.444

2.  Genetic ancestry inference using support vector machines, and the active emergence of a unique American population.

Authors:  Ryan J Haasl; Catherine A McCarty; Bret A Payseur
Journal:  Eur J Hum Genet       Date:  2012-12-05       Impact factor: 4.246

3.  Understanding the population structure of North American patients with cystic fibrosis.

Authors:  W Li; L Sun; M Corey; F Zou; S Lee; A L Cojocaru; C Taylor; S M Blackman; A Stephenson; A J Sandford; R Dorfman; M L Drumm; G R Cutting; M R Knowles; P Durie; F A Wright; L J Strug
Journal:  Clin Genet       Date:  2011-02       Impact factor: 4.438

4.  Properties of global- and local-ancestry adjustments in genetic association tests in admixed populations.

Authors:  Eden R Martin; Ilker Tunc; Zhi Liu; Susan H Slifer; Ashley H Beecham; Gary W Beecham
Journal:  Genet Epidemiol       Date:  2017-12-30       Impact factor: 2.135

5.  Evaluation of self-reported ethnicity in a case-control population: the stroke prevention in young women study.

Authors:  Jesse B Mez; John W Cole; Timothy D Howard; Leah R Macclellan; Oscar C Stine; Jeffery R O'Connell; Marcella A Wozniak; Barney J Stern; John D Sorkin; Braxton D Mitchell; Steven J Kittner
Journal:  BMC Res Notes       Date:  2009-12-18

6.  Comparing self-reported ethnicity to genetic background measures in the context of the Multi-Ethnic Study of Atherosclerosis (MESA).

Authors:  Jasmin Divers; David T Redden; Kenneth M Rice; Laura K Vaughan; Miguel A Padilla; David B Allison; David A Bluemke; Hunter J Young; Donna K Arnett
Journal:  BMC Genet       Date:  2011-03-04       Impact factor: 2.797

7.  Impact of genetic ancestry and sociodemographic status on the clinical expression of systemic lupus erythematosus in American Indian-European populations.

Authors:  Elena Sánchez; Astrid Rasmussen; Laura Riba; Eduardo Acevedo-Vasquez; Jennifer A Kelly; Carl D Langefeld; Adrianne H Williams; Julie T Ziegler; Mary E Comeau; Miranda C Marion; Ignacio García-De La Torre; Marco A Maradiaga-Ceceña; Mario H Cardiel; Jorge A Esquivel-Valerio; Jacqueline Rodriguez-Amado; José Francisco Moctezuma; Pedro Miranda; Carlos E Perandones; Cecilia Castel; Hugo A Laborde; Paula Alba; Jorge L Musuruana; I Annelise Goecke; Juan-Manuel Anaya; Kenneth M Kaufman; Adam Adler; Stuart B Glenn; Elizabeth E Brown; Graciela S Alarcón; Robert P Kimberly; Jeffrey C Edberg; Luis M Vilá; Lindsey A Criswell; Gary S Gilkeson; Timothy B Niewold; Javier Martín; Timothy J Vyse; Susan A Boackle; Rosalind Ramsey-Goldman; R Hal Scofield; Michelle Petri; Joan T Merrill; John D Reveille; Betty P Tsao; Lorena Orozco; Vicente Baca; Kathy L Moser; Patrick M Gaffney; Judith A James; John B Harley; Teresa Tusié-Luna; Bernardo A Pons-Estel; Chaim O Jacob; Marta E Alarcón-Riquelme
Journal:  Arthritis Rheum       Date:  2012-11

8.  Initial evidence of an association between OPRM1 and adolescent alcohol misuse.

Authors:  Robert Miranda; Lara Ray; Alicia Justus; Lori A Meyerson; Valerie S Knopik; John McGeary; Peter M Monti
Journal:  Alcohol Clin Exp Res       Date:  2009-10-23       Impact factor: 3.455

9.  Beta-synuclein gene variants and Parkinson's disease: a preliminary case-control study.

Authors:  Laura Brighina; Njide U Okubadejo; Nicole K Schneider; Timothy G Lesnick; Mariza de Andrade; Julie M Cunningham; Matthew J Farrer; Sarah J Lincoln; Walter A Rocca; Demetrius M Maraganore
Journal:  Neurosci Lett       Date:  2007-05-21       Impact factor: 3.046

10.  The persistence of atopic dermatitis and filaggrin (FLG) mutations in a US longitudinal cohort.

Authors:  David J Margolis; Andrea J Apter; Jayanta Gupta; Ole Hoffstad; Maryte Papadopoulos; Linda E Campbell; Aileen Sandilands; W H Irwin McLean; Tim R Rebbeck; Nandita Mitra
Journal:  J Allergy Clin Immunol       Date:  2012-08-27       Impact factor: 10.793

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