Literature DB >> 17554180

Crystallization and preliminary X-ray analysis of PH1010 from Pyrococcus horikoshii OT3, a member of the archaeal DUF54 family of proteins.

Michio Shirokane1, Yoriko Sawano, Ken Ichi Miyazono, Koji Nagata, Masaru Tanokura.   

Abstract

PH1010 from Pyrococcus horikoshii OT3, a member of the archaeal DUF54 family of proteins, was expressed, purified and crystallized. Crystallization was performed by the sitting-drop vapour-diffusion method using PEG 3350 as the precipitant. The crystal diffracted X-rays to 1.90 A resolution using a synchrotron-radiation source. The space group of the crystal was determined to be P2(1)2(1)2(1), with unit-cell parameters a = 46.9, b = 49.5, c = 132.7 A. The crystal contained two PH1010 molecules in the asymmetric unit (V(M) = 2.4 A(3) Da(-1)) and had a solvent content of 48%.

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Year:  2007        PMID: 17554180      PMCID: PMC2335084          DOI: 10.1107/S1744309107024487

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  8 in total

1.  Generation, representation and flow of phase information in structure determination: recent developments in and around SHARP 2.0.

Authors:  G Bricogne; C Vonrhein; C Flensburg; M Schiltz; W Paciorek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2003-10-23

2.  Substructure solution with SHELXD.

Authors:  Thomas R Schneider; George M Sheldrick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-09-28

3.  Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes.

Authors:  Toshiaki Fukui; Haruyuki Atomi; Tamotsu Kanai; Rie Matsumi; Shinsuke Fujiwara; Tadayuki Imanaka
Journal:  Genome Res       Date:  2005-02-14       Impact factor: 9.043

4.  Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3.

Authors:  Y Kawarabayasi; M Sawada; H Horikawa; Y Haikawa; Y Hino; S Yamamoto; M Sekine; S Baba; H Kosugi; A Hosoyama; Y Nagai; M Sakai; K Ogura; R Otsuka; H Nakazawa; M Takamiya; Y Ohfuku; T Funahashi; T Tanaka; Y Kudoh; J Yamazaki; N Kushida; A Oguchi; K Aoki; H Kikuchi
Journal:  DNA Res       Date:  1998-04-30       Impact factor: 4.458

5.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

6.  An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi.

Authors:  Georges N Cohen; Valérie Barbe; Didier Flament; Michael Galperin; Roland Heilig; Odile Lecompte; Olivier Poch; Daniel Prieur; Joël Quérellou; Raymond Ripp; Jean-Claude Thierry; John Van der Oost; Jean Weissenbach; Yvan Zivanovic; Patrick Forterre
Journal:  Mol Microbiol       Date:  2003-03       Impact factor: 3.501

7.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

8.  Divergence of the hyperthermophilic archaea Pyrococcus furiosus and P. horikoshii inferred from complete genomic sequences.

Authors:  D L Maeder; R B Weiss; D M Dunn; J L Cherry; J M González; J DiRuggiero; F T Robb
Journal:  Genetics       Date:  1999-08       Impact factor: 4.562

  8 in total

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