Literature DB >> 17549431

The non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN) of Sulfolobus solfataricus: a key-enzyme of the semi-phosphorylative branch of the Entner-Doudoroff pathway.

Thijs J G Ettema1, Hatim Ahmed, Ans C M Geerling, John van der Oost, Bettina Siebers.   

Abstract

Archaea utilize a branched modification of the classical Entner-Doudoroff (ED) pathway for sugar degradation. The semi-phosphorylative branch merges at the level of glyceraldehyde 3-phosphate (GAP) with the lower common shunt of the Emden-Meyerhof-Parnas pathway. In Sulfolobus solfataricus two different GAP converting enzymes-classical phosphorylating GAP dehydrogenase (GAPDH) and the non-phosphorylating GAPDH (GAPN)-were identified. In Sulfolobales the GAPN encoding gene is found adjacent to the ED gene cluster suggesting a function in the regulation of the semi-phosphorylative ED branch. The biochemical characterization of the recombinant GAPN of S. solfataricus revealed that-like the well-characterized GAPN from Thermoproteus tenax-the enzyme of S. solfataricus exhibits allosteric properties. However, both enzymes show some unexpected differences in co-substrate specificity as well as regulatory fine-tuning, which seem to reflect an adaptation to the different lifestyles of both organisms. Phylogenetic analyses and database searches in Archaea indicated a preferred distribution of GAPN (and/or GAP oxidoreductase) in hyperthermophilic Archaea supporting the previously suggested role of GAPN in metabolic thermoadaptation. This work suggests an important role of GAPN in the regulation of carbon degradation via modifications of the EMP and the branched ED pathway in hyperthermophilic Archaea.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17549431     DOI: 10.1007/s00792-007-0082-1

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  56 in total

1.  The ferredoxin-dependent conversion of glyceraldehyde-3-phosphate in the hyperthermophilic archaeon Pyrococcus furiosus represents a novel site of glycolytic regulation.

Authors:  J van der Oost; G Schut; S W Kengen; W R Hagen; M Thomm; W M de Vos
Journal:  J Biol Chem       Date:  1998-10-23       Impact factor: 5.157

2.  The metabolism of carbohydrates by extremely halophilic bacteria: glucose metabolism via a modified Entner-Doudoroff pathway.

Authors:  L I Hochstein
Journal:  Can J Microbiol       Date:  1974-08       Impact factor: 2.419

3.  Carbohydrate metabolism in Thermoproteus tenax: in vivo utilization of the non-phosphorylative Entner-Doudoroff pathway and characterization of its first enzyme, glucose dehydrogenase.

Authors:  B Siebers; V F Wendisch; R Hensel
Journal:  Arch Microbiol       Date:  1997-08       Impact factor: 2.552

4.  Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.

Authors:  Matthias Reher; Peter Schönheit
Journal:  FEBS Lett       Date:  2006-01-19       Impact factor: 4.124

5.  An extremely thermostable aldolase from Sulfolobus solfataricus with specificity for non-phosphorylated substrates.

Authors:  C L Buchanan; H Connaris; M J Danson; C D Reeve; D W Hough
Journal:  Biochem J       Date:  1999-11-01       Impact factor: 3.857

6.  Phenotypic characterization of the archaebacterial genus Sulfolobus: comparison of five wild-type strains.

Authors:  D W Grogan
Journal:  J Bacteriol       Date:  1989-12       Impact factor: 3.490

7.  Gluconate dehydratase from the promiscuous Entner-Doudoroff pathway in Sulfolobus solfataricus.

Authors:  Henry J Lamble; Christine C Milburn; Garry L Taylor; David W Hough; Michael J Danson
Journal:  FEBS Lett       Date:  2004-10-08       Impact factor: 4.124

8.  Whole-genome DNA microarray analysis of a hyperthermophile and an archaeon: Pyrococcus furiosus grown on carbohydrates or peptides.

Authors:  Gerrit J Schut; Scott D Brehm; Susmita Datta; Michael W W Adams
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

9.  Metabolic pathway promiscuity in the archaeon Sulfolobus solfataricus revealed by studies on glucose dehydrogenase and 2-keto-3-deoxygluconate aldolase.

Authors:  Henry J Lamble; Narinder I Heyer; Steven D Bull; David W Hough; Michael J Danson
Journal:  J Biol Chem       Date:  2003-06-24       Impact factor: 5.157

10.  The integrated microbial genomes (IMG) system.

Authors:  Victor M Markowitz; Frank Korzeniewski; Krishna Palaniappan; Ernest Szeto; Greg Werner; Anu Padki; Xueling Zhao; Inna Dubchak; Philip Hugenholtz; Iain Anderson; Athanasios Lykidis; Konstantinos Mavromatis; Natalia Ivanova; Nikos C Kyrpides
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

View more
  28 in total

1.  DNA microarray analysis of central carbohydrate metabolism: glycolytic/gluconeogenic carbon switch in the hyperthermophilic crenarchaeum Thermoproteus tenax.

Authors:  Melanie Zaparty; Alexander Zaigler; Claudia Stamme; Jörg Soppa; Reinhard Hensel; Bettina Siebers
Journal:  J Bacteriol       Date:  2008-01-04       Impact factor: 3.490

2.  The genomes of polyextremophilic cyanidiales contain 1% horizontally transferred genes with diverse adaptive functions.

Authors:  Alessandro W Rossoni; Dana C Price; Mark Seger; Dagmar Lyska; Peter Lammers; Debashish Bhattacharya; Andreas Pm Weber
Journal:  Elife       Date:  2019-05-31       Impact factor: 8.140

Review 3.  Carbohydrate metabolism in Archaea: current insights into unusual enzymes and pathways and their regulation.

Authors:  Christopher Bräsen; Dominik Esser; Bernadette Rauch; Bettina Siebers
Journal:  Microbiol Mol Biol Rev       Date:  2014-03       Impact factor: 11.056

4.  Pcal_0632, a phosphorylating glyceraldehyde-3-phosphate dehydrogenase from Pyrobaculum calidifontis.

Authors:  Iram Aziz; Naeem Rashid; Raza Ashraf; Masood Ahmed Siddiqui; Tadayuki Imanaka; Muhammad Akhtar
Journal:  Extremophiles       Date:  2017-11-25       Impact factor: 2.395

5.  Profiling of glucose-induced transcription in Sulfolobus acidocaldarius DSM 639.

Authors:  Jungwook Park; Areum Lee; Hyun-Hee Lee; Inmyoung Park; Young-Su Seo; Jaeho Cha
Journal:  Genes Genomics       Date:  2018-03-06       Impact factor: 1.839

6.  Unraveling the function of paralogs of the aldehyde dehydrogenase super family from Sulfolobus solfataricus.

Authors:  D Esser; T Kouril; F Talfournier; J Polkowska; T Schrader; C Bräsen; B Siebers
Journal:  Extremophiles       Date:  2013-01-08       Impact factor: 2.395

7.  Genome sequencing of a genetically tractable Pyrococcus furiosus strain reveals a highly dynamic genome.

Authors:  Stephanie L Bridger; W Andrew Lancaster; Farris L Poole; Gerrit J Schut; Michael W W Adams
Journal:  J Bacteriol       Date:  2012-05-25       Impact factor: 3.490

8.  Mechanism of oxygen detoxification by the surprisingly oxygen-tolerant hyperthermophilic archaeon, Pyrococcus furiosus.

Authors:  Michael P Thorgersen; Karen Stirrett; Robert A Scott; Michael W W Adams
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-23       Impact factor: 11.205

9.  Improvement of NADPH bioavailability in Escherichia coli by replacing NAD(+)-dependent glyceraldehyde-3-phosphate dehydrogenase GapA with NADP (+)-dependent GapB from Bacillus subtilis and addition of NAD kinase.

Authors:  Yipeng Wang; Ka-Yiu San; George N Bennett
Journal:  J Ind Microbiol Biotechnol       Date:  2013-09-19       Impact factor: 3.346

10.  "Hot standards" for the thermoacidophilic archaeon Sulfolobus solfataricus.

Authors:  Melanie Zaparty; Dominik Esser; Susanne Gertig; Patrick Haferkamp; Theresa Kouril; Andrea Manica; Trong K Pham; Julia Reimann; Kerstin Schreiber; Pawel Sierocinski; Daniela Teichmann; Marleen van Wolferen; Mathias von Jan; Patricia Wieloch; Sonja V Albers; Arnold J M Driessen; Hans-Peter Klenk; Christa Schleper; Dietmar Schomburg; John van der Oost; Phillip C Wright; Bettina Siebers
Journal:  Extremophiles       Date:  2009-10-04       Impact factor: 2.395

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.