Literature DB >> 17548239

Mining enzymes from extreme environments.

Manuel Ferrer1, Olga Golyshina, Ana Beloqui, Peter N Golyshin.   

Abstract

Current advances in metagenomics have revolutionized the research in fields of microbial ecology and biotechnology, enabling not only a glimpse into the uncultured microbial population and mechanistic understanding of possible biogeochemical cycles and lifestyles of extreme organisms but also the high-throughput discovery of new enzymes for industrial bioconversions. Nowadays, the genetic and enzymatic differences across the gradients from 'neutral and pristine' to 'extreme and polluted' environments are well documented. Yet, extremophilic organisms are possibly the least well understood because our ability to study and understand their metabolic potential has been hampered by our inability to isolate pure cultures. There are at least two obstacles for reaping the fruit of the microbial diversity of extremophiles: first, in spite of the recent progress in development of new culturing techniques most extremophiles cannot be cultured using traditional culturing technologies; and second, the problem of the very low biomass densities often occurs under the conditions hostile for life, which often do not yield enough DNA and reduces the effectiveness of cloning.

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Year:  2007        PMID: 17548239     DOI: 10.1016/j.mib.2007.05.004

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  37 in total

1.  Identification of cellulase genes from the metagenomes of compost soils and functional characterization of one novel endoglucanase.

Authors:  Hao Pang; Peng Zhang; Cheng-Jie Duan; Xin-Chun Mo; Ji-Liang Tang; Jia-Xun Feng
Journal:  Curr Microbiol       Date:  2009-01-22       Impact factor: 2.188

2.  Organic Solvent-Tolerant Marine Microorganisms as Catalysts for Kinetic Resolution of Cyclic β-Hydroxy Ketones.

Authors:  Bi -Shuang Chen; Hui Liu; Fayene Zeferino Ribeiro de Souza; Lan Liu
Journal:  Mar Biotechnol (NY)       Date:  2017-06-13       Impact factor: 3.619

3.  Crystallization and preliminary X-ray analysis of a cold-active β-galactosidase from the psychrotrophic and halotolerant Planococcus sp. L4.

Authors:  Liping Zhang; Kui Wang; Zhongxing Mo; Yuhuan Liu; Xiaopeng Hu
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-07-20

4.  Structural and Mechanistic Insights into the Improvement of the Halotolerance of a Marine Microbial Esterase by Increasing Intra- and Interdomain Hydrophobic Interactions.

Authors:  Ping-Yi Li; Yi Zhang; Bin-Bin Xie; Yan-Qi Zhang; Jie Hao; Yue Wang; Peng Wang; Chun-Yang Li; Qi-Long Qin; Xi-Ying Zhang; Hai-Nan Su; Mei Shi; Yu-Zhong Zhang; Xiu-Lan Chen
Journal:  Appl Environ Microbiol       Date:  2017-08-31       Impact factor: 4.792

5.  Marine microorganisms as source of stereoselective esterases and ketoreductases: kinetic resolution of a prostaglandin intermediate.

Authors:  Valerio De Vitis; Benedetta Guidi; Martina Letizia Contente; Tiziana Granato; Paola Conti; Francesco Molinari; Elena Crotti; Francesca Mapelli; Sara Borin; Daniele Daffonchio; Diego Romano
Journal:  Mar Biotechnol (NY)       Date:  2014-09-30       Impact factor: 3.619

Review 6.  Marine Bacterial Esterases: Emerging Biocatalysts for Industrial Applications.

Authors:  Noora Barzkar; Muhammad Sohail; Saeid Tamadoni Jahromi; Mohsen Gozari; Sajjad Poormozaffar; Reza Nahavandi; Mahmoud Hafezieh
Journal:  Appl Biochem Biotechnol       Date:  2021-01-07       Impact factor: 2.926

7.  Diversity of glycosyl hydrolases from cellulose-depleting communities enriched from casts of two earthworm species.

Authors:  Ana Beloqui; Taras Y Nechitaylo; Nieves López-Cortés; Azam Ghazi; María-Eugenia Guazzaroni; Julio Polaina; Axel W Strittmatter; Oleg Reva; Agnes Waliczek; Michail M Yakimov; Olga V Golyshina; Manuel Ferrer; Peter N Golyshin
Journal:  Appl Environ Microbiol       Date:  2010-07-09       Impact factor: 4.792

8.  Discovery of a novel (+)-γ-lactamase from Bradyrhizobium japonicum USDA 6 by rational genome mining.

Authors:  Shaozhou Zhu; Cuiyu Gong; Dawei Song; Shuaihua Gao; Guojun Zheng
Journal:  Appl Environ Microbiol       Date:  2012-08-10       Impact factor: 4.792

9.  Cellulolytic bacteria from soils in harsh environments.

Authors:  Fábio Lino Soares; Itamar Soares Melo; Armando Cavalcante Franco Dias; Fernando Dini Andreote
Journal:  World J Microbiol Biotechnol       Date:  2012-02-18       Impact factor: 3.312

10.  The ecology and diversity of microbial eukaryotes in geothermal springs.

Authors:  Angela M Oliverio; Jean F Power; Alex Washburne; S Craig Cary; Matthew B Stott; Noah Fierer
Journal:  ISME J       Date:  2018-04-16       Impact factor: 10.302

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