Literature DB >> 17536721

Kernel density estimators of home range: smoothing and the autocorrelation red herring.

John Fieberg1.   

Abstract

Two oft-cited drawbacks of kernel density estimators (KDEs) of home range are their sensitivity to the choice of smoothing parameter(s) and their need for independent data. Several simulation studies have been conducted to compare the performance of objective, data-based methods of choosing optimal smoothing parameters in the context of home range and utilization distribution (UD) estimation. Lost in this discussion of choice of smoothing parameters is the general role of smoothing in data analysis, namely, that smoothing serves to increase precision at the cost of increased bias. A primary goal of this paper is to illustrate this bias-variance trade-off by applying KDEs to sampled locations from simulated movement paths. These simulations will also be used to explore the role of autocorrelation in estimating UDs. Autocorrelation can be reduced (1) by increasing study duration (for a fixed sample size) or (2) by decreasing the sampling rate. While the first option will often be reasonable, for a fixed study duration higher sampling rates should always result in improved estimates of space use. Further, KDEs with typical data-based methods of choosing smoothing parameters should provide competitive estimates of space use for fixed study periods unless autocorrelation substantially alters the optimal level of smoothing.

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Year:  2007        PMID: 17536721     DOI: 10.1890/06-0930

Source DB:  PubMed          Journal:  Ecology        ISSN: 0012-9658            Impact factor:   5.499


  27 in total

Review 1.  Stochastic modelling of animal movement.

Authors:  Peter E Smouse; Stefano Focardi; Paul R Moorcroft; John G Kie; James D Forester; Juan M Morales
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-07-27       Impact factor: 6.237

Review 2.  The home-range concept: are traditional estimators still relevant with modern telemetry technology?

Authors:  John G Kie; Jason Matthiopoulos; John Fieberg; Roger A Powell; Francesca Cagnacci; Michael S Mitchell; Jean-Michel Gaillard; Paul R Moorcroft
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-07-27       Impact factor: 6.237

Review 3.  Correlation and studies of habitat selection: problem, red herring or opportunity?

Authors:  John Fieberg; Jason Matthiopoulos; Mark Hebblewhite; Mark S Boyce; Jacqueline L Frair
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-07-27       Impact factor: 6.237

4.  Long-term distribution and habitat changes of protected wildlife: giant pandas in Wolong Nature Reserve, China.

Authors:  Wenke Bai; Thomas Connor; Jindong Zhang; Hongbo Yang; Xin Dong; Xiaodong Gu; Caiquan Zhou
Journal:  Environ Sci Pollut Res Int       Date:  2018-02-08       Impact factor: 4.223

5.  Differential range use between age classes of southern African Bearded Vultures Gypaetus barbatus.

Authors:  Sonja Krüger; Timothy Reid; Arjun Amar
Journal:  PLoS One       Date:  2014-12-31       Impact factor: 3.240

6.  Prey-mediated avoidance of an intraguild predator by its intraguild prey.

Authors:  Ryan R Wilson; Terry L Blankenship; Mevin B Hooten; John A Shivik
Journal:  Oecologia       Date:  2010-10-16       Impact factor: 3.225

7.  Intrusion experiments to measure territory size: development of the method, tests through simulations, and application in the frog Allobates femoralis.

Authors:  Max Ringler; Eva Ringler; Daniela Magaña Mendoza; Walter Hödl
Journal:  PLoS One       Date:  2011-10-14       Impact factor: 3.240

8.  Dynamic approach to space and habitat use based on biased random bridges.

Authors:  Simon Benhamou
Journal:  PLoS One       Date:  2011-01-26       Impact factor: 3.240

Review 9.  Analysis and visualisation of movement: an interdisciplinary review.

Authors:  Urška Demšar; Kevin Buchin; Francesca Cagnacci; Kamran Safi; Bettina Speckmann; Nico Van de Weghe; Daniel Weiskopf; Robert Weibel
Journal:  Mov Ecol       Date:  2015-03-10       Impact factor: 3.600

10.  Is spatial autocorrelation an intrinsic property of territory size?

Authors:  Mihai Valcu; Bart Kempenaers
Journal:  Oecologia       Date:  2010-03       Impact factor: 3.225

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