Literature DB >> 20566500

Correlation and studies of habitat selection: problem, red herring or opportunity?

John Fieberg1, Jason Matthiopoulos, Mark Hebblewhite, Mark S Boyce, Jacqueline L Frair.   

Abstract

With the advent of new technologies, animal locations are being collected at ever finer spatio-temporal scales. We review analytical methods for dealing with correlated data in the context of resource selection, including post hoc variance inflation techniques, 'two-stage' approaches based on models fit to each individual, generalized estimating equations and hierarchical mixed-effects models. These methods are applicable to a wide range of correlated data problems, but can be difficult to apply and remain especially challenging for use-availability sampling designs because the correlation structure for combinations of used and available points are not likely to follow common parametric forms. We also review emerging approaches to studying habitat selection that use fine-scale temporal data to arrive at biologically based definitions of available habitat, while naturally accounting for autocorrelation by modelling animal movement between telemetry locations. Sophisticated analyses that explicitly model correlation rather than consider it a nuisance, like mixed effects and state-space models, offer potentially novel insights into the process of resource selection, but additional work is needed to make them more generally applicable to large datasets based on the use-availability designs. Until then, variance inflation techniques and two-stage approaches should offer pragmatic and flexible approaches to modelling correlated data.

Mesh:

Year:  2010        PMID: 20566500      PMCID: PMC2894958          DOI: 10.1098/rstb.2010.0079

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  35 in total

1.  Estimating temporal independence of radio-telemetry data on animal activity

Authors: 
Journal:  J Theor Biol       Date:  1999-06-21       Impact factor: 2.691

2.  Habitat-performance relationships: finding the right metric at a given spatial scale.

Authors:  Jean-Michel Gaillard; Mark Hebblewhite; Anne Loison; Mark Fuller; Roger Powell; Mathieu Basille; Bram Van Moorter
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-07-27       Impact factor: 6.237

Review 3.  The interpretation of habitat preference metrics under use-availability designs.

Authors:  Hawthorne L Beyer; Daniel T Haydon; Juan M Morales; Jacqueline L Frair; Mark Hebblewhite; Michael Mitchell; Jason Matthiopoulos
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-07-27       Impact factor: 6.237

Review 4.  Resolving issues of imprecise and habitat-biased locations in ecological analyses using GPS telemetry data.

Authors:  Jacqueline L Frair; John Fieberg; Mark Hebblewhite; Francesca Cagnacci; Nicholas J DeCesare; Luca Pedrotti
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-07-27       Impact factor: 6.237

5.  An integrated approach to identify spatiotemporal and individual-level determinants of animal home range size.

Authors:  Luca Börger; Novella Franconi; Francesco Ferretti; Fiora Meschi; Giampiero De Michele; Alberto Gantz; Tim Coulson
Journal:  Am Nat       Date:  2006-08-29       Impact factor: 3.926

6.  A general framework for the analysis of animal resource selection from telemetry data.

Authors:  Devin S Johnson; Dana L Thomas; Jay M Ver Hoef; Aaron Christ
Journal:  Biometrics       Date:  2007-11-19       Impact factor: 2.571

7.  Disentangling the effects of forage, social rank, and risk on movement autocorrelation of elephants using Fourier and wavelet analyses.

Authors:  George Wittemyer; Leo Polansky; Iain Douglas-Hamilton; Wayne M Getz
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-05       Impact factor: 11.205

Review 8.  Generalized linear mixed models: a practical guide for ecology and evolution.

Authors:  Benjamin M Bolker; Mollie E Brooks; Connie J Clark; Shane W Geange; John R Poulsen; M Henry H Stevens; Jada-Simone S White
Journal:  Trends Ecol Evol       Date:  2009-03       Impact factor: 17.712

9.  Temporal autocorrelation functions for movement rates from global positioning system radiotelemetry data.

Authors:  Mark S Boyce; Justin Pitt; Joseph M Northrup; Andrea T Morehouse; Kyle H Knopff; Bogdan Cristescu; Gordon B Stenhouse
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-07-27       Impact factor: 6.237

10.  Temporal scales, trade-offs, and functional responses in red deer habitat selection.

Authors:  Inger Maren Rivrud Godvik; Leif Egil Loe; Jon Olav Vik; Vebjørn Veiberg; Rolf Langvatn; Atle Mysterud
Journal:  Ecology       Date:  2009-03       Impact factor: 5.499

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  45 in total

1.  Distinguishing technology from biology: a critical review of the use of GPS telemetry data in ecology.

Authors:  Mark Hebblewhite; Daniel T Haydon
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-07-27       Impact factor: 6.237

Review 2.  Stochastic modelling of animal movement.

Authors:  Peter E Smouse; Stefano Focardi; Paul R Moorcroft; John G Kie; James D Forester; Juan M Morales
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-07-27       Impact factor: 6.237

3.  Wildlife tracking data management: a new vision.

Authors:  Ferdinando Urbano; Francesca Cagnacci; Clément Calenge; Holger Dettki; Alison Cameron; Markus Neteler
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-07-27       Impact factor: 6.237

Review 4.  Building a mechanistic understanding of predation with GPS-based movement data.

Authors:  Evelyn Merrill; Håkan Sand; Barbara Zimmermann; Heather McPhee; Nathan Webb; Mark Hebblewhite; Petter Wabakken; Jacqueline L Frair
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-07-27       Impact factor: 6.237

Review 5.  The home-range concept: are traditional estimators still relevant with modern telemetry technology?

Authors:  John G Kie; Jason Matthiopoulos; John Fieberg; Roger A Powell; Francesca Cagnacci; Michael S Mitchell; Jean-Michel Gaillard; Paul R Moorcroft
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-07-27       Impact factor: 6.237

6.  Animal ecology meets GPS-based radiotelemetry: a perfect storm of opportunities and challenges.

Authors:  Francesca Cagnacci; Luigi Boitani; Roger A Powell; Mark S Boyce
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-07-27       Impact factor: 6.237

Review 7.  The interpretation of habitat preference metrics under use-availability designs.

Authors:  Hawthorne L Beyer; Daniel T Haydon; Juan M Morales; Jacqueline L Frair; Mark Hebblewhite; Michael Mitchell; Jason Matthiopoulos
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-07-27       Impact factor: 6.237

Review 8.  Resolving issues of imprecise and habitat-biased locations in ecological analyses using GPS telemetry data.

Authors:  Jacqueline L Frair; John Fieberg; Mark Hebblewhite; Francesca Cagnacci; Nicholas J DeCesare; Luca Pedrotti
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-07-27       Impact factor: 6.237

9.  Focusing ecological research for conservation.

Authors:  Bogdan Cristescu; Mark S Boyce
Journal:  Ambio       Date:  2013-04-23       Impact factor: 5.129

10.  Evaluating home range techniques: use of Global Positioning System (GPS) collar data from chacma baboons.

Authors:  Paula A Pebsworth; Hanna R Morgan; Michael A Huffman
Journal:  Primates       Date:  2012-04-05       Impact factor: 2.163

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