Literature DB >> 17516659

The structure of L-tyrosine 2,3-aminomutase from the C-1027 enediyne antitumor antibiotic biosynthetic pathway.

Carl V Christianson1, Timothy J Montavon, Steven G Van Lanen, Ben Shen, Steven D Bruner.   

Abstract

The SgcC4 l-tyrosine 2,3-aminomutase (SgTAM) catalyzes the formation of (S)-beta-tyrosine in the biosynthetic pathway of the enediyne antitumor antibiotic C-1027. SgTAM is homologous to the histidine ammonia lyase family of enzymes whose activity is dependent on the methylideneimidazole-5-one (MIO) cofactor. Unlike the lyase enzymes, SgTAM catalyzes additional chemical transformations resulting in an overall stereospecific 1,2-amino shift in the substrate l-tyrosine to generate (S)-beta-tyrosine. Previously, we provided kinetic, spectroscopic, and mutagenesis data supporting the presence of MIO in the active site of SgTAM [Christenson, S. D.; Wu, W.; Spies, A.; Shen, B.; and Toney, M. D. (2003) Biochemistry 42, 12708-12718]. Here we report the first X-ray crystal structure of an MIO-containing aminomutase, SgTAM, and confirm the structural homology of SgTAM to ammonia lyases. Comparison of the structure of SgTAM to the l-tyrosine ammonia lyase from Rhodobacter sphaeroides provides insight into the structural basis for aminomutase activity. The results show that SgTAM has a closed active site well suited to retain ammonia and minimize the formation of lyase elimination products. The amino acid determinants for substrate recognition and catalysis can be predicted from the structure, setting the framework for detailed mechanistic investigations.

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Year:  2007        PMID: 17516659     DOI: 10.1021/bi7003685

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  14 in total

1.  Computational investigation of the histidine ammonia-lyase reaction: a modified loop conformation and the role of the zinc(II) ion.

Authors:  Amalia-Laura Seff; Sarolta Pilbák; Ioan Silaghi-Dumitrescu; László Poppe
Journal:  J Mol Model       Date:  2010-10-05       Impact factor: 1.810

2.  Probing the active site of MIO-dependent aminomutases, key catalysts in the biosynthesis of beta-amino acids incorporated in secondary metabolites.

Authors:  Heather A Cooke; Steven D Bruner
Journal:  Biopolymers       Date:  2010-09       Impact factor: 2.505

Review 3.  Protein-Derived Cofactors Revisited: Empowering Amino Acid Residues with New Functions.

Authors:  Victor L Davidson
Journal:  Biochemistry       Date:  2018-03-06       Impact factor: 3.162

4.  Specificity of the ester bond forming condensation enzyme SgcC5 in C-1027 biosynthesis.

Authors:  Shuangjun Lin; Tingting Huang; Geoff P Horsman; Sheng-Xiong Huang; Xun Guo; Ben Shen
Journal:  Org Lett       Date:  2012-04-20       Impact factor: 6.005

5.  Characterization of the maduropeptin biosynthetic gene cluster from Actinomadura madurae ATCC 39144 supporting a unifying paradigm for enediyne biosynthesis.

Authors:  Steven G Van Lanen; Tae-Jin Oh; Wen Liu; Evelyn Wendt-Pienkowski; Ben Shen
Journal:  J Am Chem Soc       Date:  2007-10-06       Impact factor: 15.419

6.  Regiospecific chlorination of (S)-beta-tyrosyl-S-carrier protein catalyzed by SgcC3 in the biosynthesis of the enediyne antitumor antibiotic C-1027.

Authors:  Shuangjun Lin; Steven G Van Lanen; Ben Shen
Journal:  J Am Chem Soc       Date:  2007-09-22       Impact factor: 15.419

7.  A new member of the 4-methylideneimidazole-5-one-containing aminomutase family from the enediyne kedarcidin biosynthetic pathway.

Authors:  Sheng-Xiong Huang; Jeremy R Lohman; Tingting Huang; Ben Shen
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-30       Impact factor: 11.205

Review 8.  Biosynthesis of enediyne antitumor antibiotics.

Authors:  Steven G Van Lanen; Ben Shen
Journal:  Curr Top Med Chem       Date:  2008       Impact factor: 3.295

9.  A free-standing condensation enzyme catalyzing ester bond formation in C-1027 biosynthesis.

Authors:  Shuangjun Lin; Steven G Van Lanen; Ben Shen
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-25       Impact factor: 11.205

10.  Structural and biochemical characterization of the therapeutic Anabaena variabilis phenylalanine ammonia lyase.

Authors:  Lin Wang; Alejandra Gamez; Holly Archer; Enrique E Abola; Christineh N Sarkissian; Paul Fitzpatrick; Dan Wendt; Yanhong Zhang; Michel Vellard; Joshua Bliesath; Sean M Bell; Jeffrey F Lemontt; Charles R Scriver; Raymond C Stevens
Journal:  J Mol Biol       Date:  2008-05-17       Impact factor: 5.469

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